Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12f23f
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160212-1|AAF67013.1| 243|Homo sapiens VAMP-associated 33 kDa ... 75 1e-13
BT009811-1|AAP88813.1| 243|Homo sapiens VAMP (vesicle-associate... 75 3e-13
BC001712-1|AAH01712.1| 243|Homo sapiens VAPB protein protein. 75 3e-13
AY358464-1|AAQ88829.1| 243|Homo sapiens VAPB protein. 75 3e-13
AL035455-3|CAC15021.1| 243|Homo sapiens VAMP (vesicle-associate... 75 3e-13
AF086628-1|AAD13577.1| 243|Homo sapiens VAMP-associated protein... 75 3e-13
AL035455-2|CAM27023.1| 99|Homo sapiens VAMP (vesicle-associate... 74 5e-13
AF086629-1|AAD13578.1| 99|Homo sapiens VAMP-associated protein... 74 5e-13
BT019618-1|AAV38424.1| 242|Homo sapiens VAMP (vesicle-associate... 72 1e-12
BC002992-1|AAH02992.2| 249|Homo sapiens VAMP (vesicle-associate... 72 1e-12
AF154847-1|AAF72105.1| 242|Homo sapiens 33 kDa Vamp-associated ... 72 1e-12
AF086627-1|AAD13576.1| 242|Homo sapiens VAMP-associated protein... 72 1e-12
AF057358-1|AAC26508.1| 242|Homo sapiens VAMP-associated protein... 72 1e-12
AF044670-1|AAD09742.1| 242|Homo sapiens 33 kDa Vamp-associated ... 72 1e-12
AB209665-1|BAD92902.1| 84|Homo sapiens VAMP-associated protein... 60 4e-09
BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain con... 45 2e-04
AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein pr... 45 2e-04
AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens ... 45 2e-04
BC011653-1|AAH11653.1| 235|Homo sapiens motile sperm domain con... 33 1.0
BC005042-1|AAH05042.1| 235|Homo sapiens motile sperm domain con... 33 1.0
AF053356-8|AAC78798.1| 235|Homo sapiens ORF3splicevariant_b pro... 33 1.0
AF053356-7|AAC78799.1| 221|Homo sapiens ORF3splicevariant_a pro... 33 1.0
>AF160212-1|AAF67013.1| 243|Homo sapiens VAMP-associated 33 kDa
protein protein.
Length = 243
Score = 75.4 bits (177), Expect = 1e-13
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSGV+
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVI 61
Query: 578 APNSKQEIAI 607
+ +++
Sbjct: 62 DAGASLNVSV 71
>BT009811-1|AAP88813.1| 243|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 243
Score = 74.5 bits (175), Expect = 3e-13
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
+ +++
Sbjct: 62 DAGASINVSV 71
>BC001712-1|AAH01712.1| 243|Homo sapiens VAPB protein protein.
Length = 243
Score = 74.5 bits (175), Expect = 3e-13
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
+ +++
Sbjct: 62 DAGASINVSV 71
>AY358464-1|AAQ88829.1| 243|Homo sapiens VAPB protein.
Length = 243
Score = 74.5 bits (175), Expect = 3e-13
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
+ +++
Sbjct: 62 DAGASINVSV 71
>AL035455-3|CAC15021.1| 243|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 243
Score = 74.5 bits (175), Expect = 3e-13
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
+ +++
Sbjct: 62 DAGASINVSV 71
>AF086628-1|AAD13577.1| 243|Homo sapiens VAMP-associated protein B
protein.
Length = 243
Score = 74.5 bits (175), Expect = 3e-13
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
+ +++
Sbjct: 62 DAGASINVSV 71
>AL035455-2|CAM27023.1| 99|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 99
Score = 73.7 bits (173), Expect = 5e-13
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
>AF086629-1|AAD13578.1| 99|Homo sapiens VAMP-associated protein C
protein.
Length = 99
Score = 73.7 bits (173), Expect = 5e-13
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
QVL++EPQ+ELKF+ G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFR----GPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
>BT019618-1|AAV38424.1| 242|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein A, 33kDa protein.
Length = 242
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
Q+L ++P +LKFK G F TT ++L NP++ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QILVLDPPTDLKFK----GPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
P S +++
Sbjct: 62 DPGSTVTVSV 71
>BC002992-1|AAH02992.2| 249|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein A, 33kDa protein.
Length = 249
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
Q+L ++P +LKFK G F TT ++L NP++ V FK+KTTAP++YCVRPNSG++
Sbjct: 13 QILVLDPPTDLKFK----GPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGII 68
Query: 578 APNSKQEIAI 607
P S +++
Sbjct: 69 DPGSTVTVSV 78
>AF154847-1|AAF72105.1| 242|Homo sapiens 33 kDa Vamp-associated
protein protein.
Length = 242
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
Q+L ++P +LKFK G F TT ++L NP++ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QILVLDPPTDLKFK----GPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
P S +++
Sbjct: 62 DPGSTVTVSV 71
>AF086627-1|AAD13576.1| 242|Homo sapiens VAMP-associated protein A
protein.
Length = 242
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
Q+L ++P +LKFK G F TT ++L NP++ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QILVLDPPTDLKFK----GPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
P S +++
Sbjct: 62 DPGSTVTVSV 71
>AF057358-1|AAC26508.1| 242|Homo sapiens VAMP-associated protein of
33 kDa protein.
Length = 242
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
Q+L ++P +LKFK G F TT ++L NP++ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QILVLDPPTDLKFK----GPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
P S +++
Sbjct: 62 DPGSTVTVSV 71
>AF044670-1|AAD09742.1| 242|Homo sapiens 33 kDa Vamp-associated
protein protein.
Length = 242
Score = 72.1 bits (169), Expect = 1e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +2
Query: 398 QVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
Q+L ++P +LKFK G F TT ++L NP++ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QILVLDPPTDLKFK----GPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGII 61
Query: 578 APNSKQEIAI 607
P S +++
Sbjct: 62 DPGSTVTVSV 71
>AB209665-1|BAD92902.1| 84|Homo sapiens VAMP-associated protein
B/C variant protein.
Length = 84
Score = 60.5 bits (140), Expect = 4e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +2
Query: 440 VNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 577
+ F G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 1 LKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 46
>BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain
containing 2 protein.
Length = 518
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 401 VLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLA 580
+L I P EL F SG + T + LTN T + V FK++TTAP+KY V+P++
Sbjct: 327 LLHISPAEELYFGSTESGEKK----TLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCD 382
Query: 581 PNSKQEIAI 607
P + +I +
Sbjct: 383 PGASVDIVV 391
>AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein
protein.
Length = 243
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 401 VLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLA 580
+L I P EL F SG + T + LTN T + V FK++TTAP+KY V+P++
Sbjct: 52 LLHISPAEELYFGSTESGEKK----TLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCD 107
Query: 581 PNSKQEIAI 607
P + +I +
Sbjct: 108 PGASVDIVV 116
>AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ35756 fis, clone TESTI2004687. ).
Length = 455
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +2
Query: 401 VLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLA 580
+L I P EL F SG + T + LTN T + V FK++TTAP+KY V+P++
Sbjct: 264 LLHISPAEELYFGSTESGEKK----TLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCD 319
Query: 581 PNSKQEIAI 607
P + +I +
Sbjct: 320 PGASVDIVV 328
>BC011653-1|AAH11653.1| 235|Homo sapiens motile sperm domain
containing 3 protein.
Length = 235
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 482 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI 607
+ L NPT + F++ TAP KY V G + P S +I I
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI 96
>BC005042-1|AAH05042.1| 235|Homo sapiens motile sperm domain
containing 3 protein.
Length = 235
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 482 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI 607
+ L NPT + F++ TAP KY V G + P S +I I
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI 96
>AF053356-8|AAC78798.1| 235|Homo sapiens ORF3splicevariant_b
protein.
Length = 235
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 482 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI 607
+ L NPT + F++ TAP KY V G + P S +I I
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI 96
>AF053356-7|AAC78799.1| 221|Homo sapiens ORF3splicevariant_a
protein.
Length = 221
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 482 MRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSKQEIAI 607
+ L NPT + F++ TAP KY V G + P S +I I
Sbjct: 41 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,439,511
Number of Sequences: 237096
Number of extensions: 1617707
Number of successful extensions: 6377
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6363
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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