Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f22f
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    27   0.12 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.62 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   5.8  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 104 PKGFLFGAATASYQIEGAWNIDGKTENI 187
           PKG L   A ++  I+ A++I G +EN+
Sbjct: 169 PKGHLLTIAVSAIPIDDAYDIPGMSENV 196


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 46  FISIINIVMYFNECNFARI 102
           FI+++ I +YF  C F+R+
Sbjct: 451 FITLLTIGLYFQLCEFSRL 469


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 266 LYKRDVEMIRELGV 307
           L  RDVE+I+++GV
Sbjct: 38  LLLRDVELIKQIGV 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,424
Number of Sequences: 336
Number of extensions: 3232
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)