Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12f20f
(488 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 47 1e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 41 6e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 40 8e-04
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.003
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 33 0.17
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 32 0.29
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 32 0.29
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 31 0.39
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.39
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 0.51
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 31 0.67
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.89
SB_11973| Best HMM Match : Cupin_1 (HMM E-Value=3.4) 30 0.89
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 30 1.2
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 29 1.6
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 29 1.6
SB_4313| Best HMM Match : Zip (HMM E-Value=1.7e-39) 29 2.1
SB_44379| Best HMM Match : Peptidase_M28 (HMM E-Value=6.6e-11) 29 2.1
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 29 2.7
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 28 3.6
SB_10727| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 3.6
SB_33425| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 28 4.7
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 27 6.3
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 27 6.3
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 27 6.3
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 27 6.3
SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08) 27 8.3
SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 27 8.3
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_27136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Frame = +1
Query: 157 GLR-DTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGIN 333
G+R +TRIVGG+ A G++P+Q +L+ P +LTA HC
Sbjct: 4 GIRPNTRIVGGTAAKHGDWPWQ----AQLRTTSGFPYCGGSLIAPQWILTATHC--VERK 57
Query: 334 QGWLITVVLGS-VTLFTGGTRVD--TSSVILHPDWF-PVLYRNDVAVIHLTSPV 483
Q I + LG+ + T GT D + VI HP + P Y +D+A++ L PV
Sbjct: 58 QASSIVIRLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALLKLDKPV 111
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 45.6 bits (103), Expect = 2e-05
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = +1
Query: 157 GLRDTRIVGGSPASLGEFPYQXXXXXXXXXXXXX-XXXXXTLVTPTRLLTAAHCWFDGIN 333
G +TRIVGG+ A G +P+Q ++V P ++TAAHC F
Sbjct: 98 GKGNTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHC-FAYSK 156
Query: 334 QGWLITVVLGSVTL-FTGG--TRVDTSSVILHPDWFPVLYRN-DVAVIHLTSPV 483
T+ +G L T G R D +ILHP + P + DVA+I L SP+
Sbjct: 157 DAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPL 210
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Frame = +1
Query: 145 AEEAGLRDT---RIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHC 315
AE G+ D+ R+V G A+LGE+P+Q +L+ P +LTA HC
Sbjct: 49 AEHCGVSDSASSRVVSGDDATLGEWPWQ----AWLHVTPHGFVCGGSLIAPQWVLTAGHC 104
Query: 316 WFDGINQGWLITVVLGSVTLFT--GGTRV-DTSSVILHPDWF-PVLYRNDVAVIHLTSP 480
+ + VVLG V T G ++ +I HP + V Y NDVA++ L+ P
Sbjct: 105 ILTEDPEKY--RVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRP 161
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 41.5 bits (93), Expect = 4e-04
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Frame = +1
Query: 121 PEAERIRTAEEAGLRD--TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTR 294
P + + G+R +RIVGG+ A GE+P+Q LV
Sbjct: 191 PPVPPVPSVPNCGVRPPASRIVGGNDAMHGEWPWQ-AMLMFQTPLGYKQFCGGALVHEDW 249
Query: 295 LLTAAHCWFDGINQGWLITVV-LG---SVTLFTGGTRVDTSSVILHPDW--FPVLYRNDV 456
++TA+HC D + + ++ LG + + R+ + + LH D+ +P Y NDV
Sbjct: 250 VVTASHCINDIRPEDYKTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDV 309
Query: 457 AVIHLTSP 480
A+I L P
Sbjct: 310 ALIRLAKP 317
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 41.1 bits (92), Expect = 5e-04
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLI 348
+RIVGGS A G +P+Q TLVTP ++TAAHC D I
Sbjct: 629 SRIVGGSTAPPGAWPWQVMLIYNSGRQFCGG----TLVTPEWVITAAHCVVD--KNPASI 682
Query: 349 TVVLGSVTLFTGG----TRVDTSSVILHPDW-FPVLYRNDVAVIHLTSP 480
V LG+ + R+ S+ HPD+ P ND+A++ L+ P
Sbjct: 683 QVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRP 731
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 40.7 bits (91), Expect = 6e-04
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +1
Query: 136 IRTAEEAGLRDTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHC 315
+ T A + TR++ GS A LGE+P+Q +LV P +LTAAHC
Sbjct: 19 LETCGRAEVPATRVISGSEALLGEWPWQ----AWLHLQHTGFICGGSLVAPGWVLTAAHC 74
Query: 316 WFDGINQGWLITVVLGSV--TLFTGGTR-VDTSSVILHPDW-FPVLYRNDVAVIHL 471
+ VVLG V G + +D + VI H + PV NDVA++ L
Sbjct: 75 ILS--DDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALLKL 128
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 40.7 bits (91), Expect = 6e-04
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWF-DGINQGWL 345
TRIVGG+ A G +P+Q TLV P ++TAAHC + G N
Sbjct: 138 TRIVGGTKAPPGAWPWQ----AMLRSNYGGQFCGGTLVHPQWVITAAHCVYRRGPND--- 190
Query: 346 ITVVLGS-VTLFTGGTRVD--TSSVILHPDWF-PVLYRNDVAVIHLTSP 480
+ +G+ GT D S VI HP + P Y +D+A+I L P
Sbjct: 191 FKIRMGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKP 239
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 40.3 bits (90), Expect = 8e-04
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = +1
Query: 136 IRTAEEAGLR-DTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAH 312
+R A G R TRI+ GS A +P+ TLV+P ++TAAH
Sbjct: 338 VRLALSCGYRYGTRIISGSDAQPNSWPWMVQINYNNGHHCGG-----TLVSPQWVVTAAH 392
Query: 313 C---WFDGINQGWLITVVLGSVTLFTGGT--RVDTSSVILHPDWF-PVLYRNDVAVIHLT 474
C D N L + + GT R + +I+HP +F P ND+A+I L
Sbjct: 393 CVDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLN 452
Query: 475 SP 480
P
Sbjct: 453 KP 454
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +1
Query: 274 TLVTPTRLLTAAHCWFDGINQGWLITVVLGS-VTLFTGGTRV--DTSSVILHPDWFPVLY 444
+LV+PT ++TAAHC G + VV G + GT D +I HP +
Sbjct: 96 SLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNSPQL 154
Query: 445 RNDVAVIHLTSPV 483
ND+A+I L+SPV
Sbjct: 155 SNDIALIELSSPV 167
Score = 35.5 bits (78), Expect = 0.024
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Frame = +1
Query: 43 LLAYATVAALPLDENPLYGYLTKYGVPEAERIRTAEEAGLR-DTRIVGGSPASLGEFPYQ 219
++ Y+ + +D+ + T+ P + G+R TRIVGG+ A G++P+Q
Sbjct: 621 IVGYSYQGDIAIDDVTIKSCATRPPFPTTQA--PVASCGVRPSTRIVGGTAAKQGDWPWQ 678
Query: 220 XXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLITVVLGSVTLFTGGTR-V 396
+L+ P +LTA HC I + + G + +
Sbjct: 679 ----AQLRSTSGFPFCGGSLIHPQWVLTATHCVSSRRPTDLNIRLGAHNRRANLGMEQDI 734
Query: 397 DTSSVILHPDW-FPVLYRNDVAVIHLTSP 480
+I+HP + PV +D+A+I L P
Sbjct: 735 KVEKIIMHPGYRKPVGLAHDIALIKLLKP 763
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 38.3 bits (85), Expect = 0.003
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Frame = +1
Query: 172 RIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWL-- 345
RIVGG A + ++P+Q +L+ ++TAAHC D N
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTIVCGG---SLINREWVVTAAHC-IDRNNPSRTGC 487
Query: 346 ------ITVVLGS--VTLFTGGT-RVDTSSVILHPDWFPVLYRNDVAVIHLTSPV 483
I V+LG VT G D + + +HPD+ + ND+A+I L +P+
Sbjct: 488 VVPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPI 542
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 37.1 bits (82), Expect = 0.008
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Frame = +1
Query: 160 LRDTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQG 339
+ +R++GG A G +P+Q +LV+ T ++TAAHC N
Sbjct: 472 ITQSRVIGGKDAIPGAWPWQIALKSRGNFICGG-----SLVSSTWVVTAAHCVARSSNPA 526
Query: 340 WLITVVLG----SVTLFTGGTRVDTSSVILHPDWFPVLYRNDVAVIHLTSP 480
+++G +V T T ++ VI HP + ND+A+I L SP
Sbjct: 527 QY-QIIVGEHNRNVNEVTEET-LNVKKVIAHPQYNNPRLSNDIALIELASP 575
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 36.7 bits (81), Expect = 0.010
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +1
Query: 166 DTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWL 345
++RIVGG+ A G +P+Q TLV P ++TA+HC + G L
Sbjct: 246 NSRIVGGTTAQRGAWPWQ----AMLRYYNGNHFCGGTLVHPRWVVTASHC-VHKLTTGDL 300
Query: 346 ITVVLGSVTLFTGGTRVD--TSSVILHPDWF-PVLYRNDVAVIHLTSP 480
+ G+ D + +HP++ PV Y ND+A++ L P
Sbjct: 301 YVRMGAHWKDGKTGSEQDFRIQRIFMHPNYHSPVQYANDIALLLLDRP 348
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 33.5 bits (73), Expect = 0.096
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +1
Query: 175 IVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLITV 354
I+GG+ A GE+P+Q +++P +LTAAHC D + I +
Sbjct: 546 IMGGANAEHGEWPWQ--VSMKLNSSSLPHICGGNVISPWWVLTAAHCVQD--ERASNIKL 601
Query: 355 VLGSVTLF-TGGTR--VDTSSVILHPDWFPVLYRNDVAVIHLTSPV 483
+G LF GT + +I H ++ D A++ LT P+
Sbjct: 602 TMGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPL 647
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 33.5 bits (73), Expect = 0.096
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLI 348
+RIVGG+ A + +P+Q +L+ P +LTAAHC L+
Sbjct: 28 SRIVGGTEAPINGWPWQ---AMLLRSPNGDQFCGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 349 TVVLGSVTLFTGGTRVDTSSVILHPDWF-PVLYRNDVAVIHLTSP 480
S + + +I H ++ P+ ND+A++ L +P
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENP 129
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.5 bits (73), Expect = 0.096
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 172 RIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLIT 351
RI+ G A +P+Q +L++ ++TAAHC N G T
Sbjct: 105 RIINGQNAQPHSWPWQISLRGRSGFHTCGG----SLISDRWVVTAAHCIHRNKNPGGY-T 159
Query: 352 VVLGSVTLFTGGTRVDTS----SVILHPDWFPVLYRNDVAVIHLTSPV 483
VV+G+ G T V S +I HP + ND+A++ L +PV
Sbjct: 160 VVVGAHKK-RGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPV 206
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 32.7 bits (71), Expect = 0.17
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 151 EAGLRDT-RIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDG 327
+ G++ T I+GG+ A++GE+P+Q TL+T +LTAA C+ D
Sbjct: 249 DCGIKYTSNIIGGTDAAVGEWPWQ----VSLYLTHYGPVCGGTLLTSEWVLTAARCFRDN 304
Query: 328 INQG-WLITVVLGSVTLF 378
G W V+LG +
Sbjct: 305 KRAGEW--KVILGETDFY 320
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 31.9 bits (69), Expect = 0.29
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +1
Query: 172 RIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLIT 351
RIVGG A +P+Q +L++P LLTAAHC N T
Sbjct: 30 RIVGGDEAVPHSWPWQVSIRLKGSHICGG-----SLLSPLWLLTAAHCVIRS-NNSADYT 83
Query: 352 VVLGSVTLFTGGTRVDTSSVILHPDWFPVL-YRNDVAVIHLTSP 480
V++G+ GT S+ H + ++D+A+I L P
Sbjct: 84 VIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKP 127
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 31.9 bits (69), Expect = 0.29
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +1
Query: 274 TLVTPTRLLTAAHCWFDGINQGWLITVVLGSVTLFTGGTRVD---TSSVILHPDWF---P 435
TL+ P ++TAAHC +G +T +L V+ + +D + L P+W
Sbjct: 156 TLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELDYFAVEGIYLPPEWLSGKD 215
Query: 436 VLYRNDVAVIHLTSP 480
+ +D A++ LT P
Sbjct: 216 FSHEHDYALLKLTEP 230
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 31.5 bits (68), Expect = 0.39
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 172 RIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWF 321
RIVGG+ A G +P+Q L+ +LTAAHC++
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFY 175
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.5 bits (68), Expect = 0.39
Identities = 28/98 (28%), Positives = 41/98 (41%)
Frame = +1
Query: 70 LPLDENPLYGYLTKYGVPEAERIRTAEEAGLRDTRIVGGSPASLGEFPYQXXXXXXXXXX 249
LP E+ LYGY K G IR ++RIVGG A +P+Q
Sbjct: 218 LPFIESTLYGY-PKCG------IRYLPSGPPPESRIVGGREAPRNSWPWQ-VEIILKTPN 269
Query: 250 XXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLITVVLG 363
+L+ P +LT++HC++ N + LG
Sbjct: 270 LTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 307
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.1 bits (67), Expect = 0.51
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLI 348
+RIVGG+ A+ G++P+Q +L+ +LTAAHC + +
Sbjct: 389 SRIVGGAAANPGDWPWQ----AQLRTTTGFPYCGGSLIHSNWVLTAAHC--ISSKRPAEV 442
Query: 349 TVVLGS----VTLFTGGTRVDTSSVILHPDWFPVLYRNDVAVIHL 471
V LG+ +L T + S++I H ++ ND+A++ L
Sbjct: 443 VVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALLKL 487
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 31.1 bits (67), Expect = 0.51
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGIN-QGWL 345
+RI+GG+ A+ ++P+Q TL+ ++TAAHC F I +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGG-TLIDTEWVVTAAHCVFQNIEPSNYK 341
Query: 346 ITVVLGSVTLFTGGTRVDTSSVILHPDWF-PVLYRNDVAVIHLTSP 480
I + G + +++ +H + Y D+A++ L +P
Sbjct: 342 IKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANP 387
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.7 bits (66), Expect = 0.67
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLI 348
TRIVGG+ A +P+Q TLV P ++TA+HC D L
Sbjct: 22 TRIVGGTAAPKNAWPWQ----AQLRSASGFPFCGGTLVHPRFVVTASHC-IDKKTPSSL- 75
Query: 349 TVVLGSVTLFTGG--TRVD--TSSVILHPDWF-PVLYRNDVAVIHLTSP 480
+ LG+ G T D +I H + PV ND+AVI L P
Sbjct: 76 RIRLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEP 124
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 30.3 bits (65), Expect = 0.89
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 274 TLVTPTRLLTAAHCWFDGINQGWLITVVLGSVTLFTGGTRVDTSSVILHPDWFPVLYRND 453
+L+TP LTAAHC + T+V G+ G S + H + V RND
Sbjct: 269 SLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRND 327
Query: 454 VAVIHLTSPV 483
VA++ L++ V
Sbjct: 328 VALLKLSTYV 337
>SB_11973| Best HMM Match : Cupin_1 (HMM E-Value=3.4)
Length = 394
Score = 30.3 bits (65), Expect = 0.89
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Frame = -1
Query: 431 NQSGCSITELVSTLVPPVKSVTDPRTT--VMSQP*LIPSNQQ*AAVNSLVGV---TSVAP 267
+Q + +++ T+ PV + T+ V++Q + P Q+ A ++ G +V P
Sbjct: 59 HQPNPTTSQVHITMATPVSQMVAGATSQGVITQQTIAPM-QRIAPASTTTGTGQKMTVIP 117
Query: 266 QTPTFTLLTMATIRPAW*GNSPRLAGEPPTILVSLRPASSAVRILSASGTPYLV 105
T T TLL P G + + + + + +PA SAV + S P +V
Sbjct: 118 ATTTVTLLPQGAAVPGSVGGAGTTSQQIQHMQIQAQPAGSAVTAQTVSAQPTMV 171
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 29.9 bits (64), Expect = 1.2
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFDGINQGWLI 348
TRI+ G A +P+Q +L++P LTAAHC N
Sbjct: 84 TRIINGEEAVPNSWPWQLSLRVYGSHNCGA-----SLLSPGWALTAAHCVQRSSNPADYT 138
Query: 349 TVVLGSVTLFTGGTRV-DTSSVILHPDWFPVLYRNDVAVIHLTSPV 483
+ +V S VI H ++ RNDV ++ L++PV
Sbjct: 139 LAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLSAPV 184
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHC 315
TRIVGG+ A + +P+Q +L+ P +LTAAHC
Sbjct: 258 TRIVGGTEAPVNGWPWQ----AMLRSAGGSQFCGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 169 TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHC 315
TRIVGG+ A + +P+Q +L+ P +LTAAHC
Sbjct: 218 TRIVGGTEAPVNGWPWQ----AMLRSAGGSQFCGGSLIHPEWVLTAAHC 262
>SB_4313| Best HMM Match : Zip (HMM E-Value=1.7e-39)
Length = 318
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 372 CHRSKNNRYEPTLIDTIEPAVSSCQQSGRGNKRRSADT 259
CH+ + + ++T P + + Q+G GNK RS D+
Sbjct: 85 CHKKARFFHGHSHVETTAPLLGTPPQNGYGNKERSEDS 122
>SB_44379| Best HMM Match : Peptidase_M28 (HMM E-Value=6.6e-11)
Length = 1098
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 435 REPVGVQYNRTSVNPGASGKECHRSKNNRYEPTLI 331
R+ G Y+R S++ GA GK C R ++ + T +
Sbjct: 5 RQSRGTHYDRMSIDSGAHGKVCFRHNDSFADSTTL 39
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +1
Query: 274 TLVTPTRLLTAAHCWFDGINQGWLITVVLGSVTLFTGGTRVDTSSVILHPDWFPVLYRN 450
+L+TP +LTAAHC D TVV+G GG + IL PV Y N
Sbjct: 66 SLITPEWVLTAAHC-VDHYPYPGAYTVVVGWGRTVGGGQGAE----ILQQAMLPVAYDN 119
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 157 GLRD-TRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHC 315
G+R TRIVGG+ A +P+Q +L+ P +LTA HC
Sbjct: 47 GIRPHTRIVGGTAAKQNSWPWQ----AQLRTTSGFPYCGGSLIHPQWILTATHC 96
>SB_10727| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 215
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 477 TRQMDDSNIVAVKNREPVGVQYNRTSVNPGASGKECHRSKNNRYEPTLIDTIEP 316
T+ +D+SNI+ K+ P Q+ P +S ++ PTL ++P
Sbjct: 15 TKSLDESNIILGKSFLPPSKQFGVYPTPPSSSNSHSPSVDSSMLTPTLKHPVDP 68
>SB_33425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 396 NPGASGKECHRSKNNRYEPTLIDTIEPAV 310
NPG+SGK+ H +N+ T ++ I+ AV
Sbjct: 891 NPGSSGKDTHAKLSNQDPFTQLEVIQLAV 919
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 274 TLVTPTRLLTAAHCWFDGINQGWLITVVLGSVTLFTGGTRVDTSSVILHPDWFPVL-YRN 450
+L++ T +LTAAHC N TV++G+ GT S+ H + ++
Sbjct: 343 SLLSSTWVLTAAHCVIRSHNTS-DYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKDKKH 401
Query: 451 DVAVIHLTSP 480
D+A+I L P
Sbjct: 402 DLALIRLAKP 411
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 142 TAEEAGLRDTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXX-XXTLVTPTRLLTAAHC 315
T++ + RI GGS + G +P+Q TL+ +LTAAHC
Sbjct: 1150 TSKPTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 397 DTSSVILHPDWFPVLYRNDVAVIHLTSPV 483
D +HP + P Y +D+A+I L PV
Sbjct: 192 DAEMYKIHPHYSPDSYDSDIALIRLAQPV 220
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = -1
Query: 398 STLVPPVKSVTDPRTTVMSQP*LIPSNQQ*AAVNSLVGVTSVAPQTPTFTLLTMATIRPA 219
+T + P T TTV S+P + N ++ T++AP T T +PA
Sbjct: 359 TTTIAPAAEGTKSNTTVTSKPAWLTQN------SNTTTTTTIAPAPEGTKSNTTVTSKPA 412
Query: 218 W*GNSPRLAGEPPTILVSLRPASSA 144
W + TI P ++A
Sbjct: 413 WLTQNSNTTTTTSTIATPKTPDTTA 437
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 394 VDTSSVILHPDWFPVLYRNDVAVIHLTSPV 483
+ S VI HP++ +ND+A++ L+ PV
Sbjct: 152 IPVSHVIEHPEYDDRKIKNDIALLELSRPV 181
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 465 DDSNI-VAVKNREPVGVQYNRTSVNPGASGKECHRSKNNRYEPTLIDTIEPAVSSCQ 298
DDSN+ + E GV N +S++ +R++ P+L + IEP S+CQ
Sbjct: 299 DDSNLQTPEEGNENNGVCANNSSLSLEQISNSTYRTEVLEEFPSLQNYIEPQESACQ 355
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 157 GLRDTRIVGGSPASLGEFPYQXXXXXXXXXXXXXXXXXXTLVTPTRLLTAAHCWFD 324
GL D RIVGG +S G +P+Q +L+ ++TA HC+ D
Sbjct: 48 GLIDKRIVGGVVSSEGLWPWQ-----VALLLNDRQVCAGSLIEARWIITAGHCFKD 98
>SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)
Length = 1188
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3
Query: 450 VAVKNREPVGVQYNRTSVNPGASGKECHRSKNNRYEPTLIDTIEPAVSS 304
V N EPV V + A +C S + EP L +EP +SS
Sbjct: 517 VLASNVEPVLVSPALLNQCSSAMSNQCSASLASIVEPVLASNVEPVLSS 565
>SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 363 SKNNRYEPTLIDTIEPAVSSCQQSGRGNKRRSADTHVYIIDDGDDQTGLVREFSKTSRRA 184
S N E T+ D AV SC++ ++ S D + D+ DD + S+ R
Sbjct: 602 SNGNFGETTIRDVRGCAVESCREIETVSEVASGDFNNLGYDNSDDVFPSTEDSSEDQSRV 661
Query: 183 TNDSG 169
++D G
Sbjct: 662 SSDGG 666
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -3
Query: 345 EPTLIDTIEPAVSSCQQSGRGNKRRSADTHVYIIDDGDDQTGLVREFSKTSRRATNDSGI 166
E ++D ++ A + RG++ + + D+QT V + S T+ + ND
Sbjct: 321 EQDIVDQVQRANVASTPKTRGDREHNEEV---TSQSHDEQTDSVNDHSPTANKNNNDDTT 377
Query: 165 PQT 157
P T
Sbjct: 378 PNT 380
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 274 TLVTPTRLLTAAHCWFDG 327
TLV+P +LTAAHC G
Sbjct: 171 TLVSPRHVLTAAHCLHTG 188
>SB_27136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 297 QSGRGNKRRSADTHVYIIDDGDDQTGLVREFSKTSRRATNDS 172
QSG+G RR + + D G L R F K S ATND+
Sbjct: 324 QSGQGKLRRK---NPFRSDSGTGGAKLSRYFVKVSTEATNDN 362
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,219,998
Number of Sequences: 59808
Number of extensions: 357799
Number of successful extensions: 1200
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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