Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f17f
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.33 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   5.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   5.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.3  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 27.5 bits (58), Expect = 0.33
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 490 SISSEARFWRLRNDIRLSRTTFHTQDS 570
           S + + R W+L  D+RL+  TFH + S
Sbjct: 532 SETMDVRGWKLPKDVRLADPTFHERGS 558


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 13/58 (22%), Positives = 23/58 (39%)
 Frame = +2

Query: 260 CCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEEKK 433
           C +      I    K  P   +    H+VE    R C   E ++   L + +P+E ++
Sbjct: 217 CVKENGFLSISSSRKQCPAVGDCPDQHIVERDCCRVCNYTEAQMAPGLTTASPVEPEE 274


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 382 FDNLTGSVEKIFYHVEELRIR 320
           F  L  ++E +  H+EELR+R
Sbjct: 805 FTELPDTIELVDAHLEELRVR 825


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 155  AAWWLIMLSTTIGLGIGSPYTY 90
            A +WL +L T IG    S Y Y
Sbjct: 1036 ATYWLSVLPTPIGAWQNSNYNY 1057


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -1

Query: 198 FLSGGTTDLAIFLRCSMVAYYVKYDNRVRNRVALH 94
           F   G  D+ I        + +  DNR+   +ALH
Sbjct: 513 FTIDGYPDIGIVFNTKRSYWKLSMDNRIMTYIALH 547


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,764
Number of Sequences: 2352
Number of extensions: 12453
Number of successful extensions: 235
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)