Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12f16r
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 71 9e-13
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 63 2e-10
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 47 1e-05
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 39 0.004
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 36 0.023
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 35 0.054
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 33 0.22
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 33 0.29
AL117205-4|CAB55162.1| 441|Caenorhabditis elegans Hypothetical ... 31 1.2
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 29 3.5
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 29 3.5
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 28 6.2
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 8.1
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 8.1
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 70.9 bits (166), Expect = 9e-13
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 6/241 (2%)
Frame = -1
Query: 716 RIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFT 537
R++GG+ + + P+ LL + + CGGS++ P +LTAAHC+ R R ++
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDR-RPTSYS 111
Query: 536 VVLGTPFLFHGGLRIQASSIAVHHQYDFR-TFANDIAMLYLPRRIIFNHAVQPIPLATDS 360
V +G G + +++++H Y+ + D A++ + + N + P+ S
Sbjct: 112 VRVG-GHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPV--NTSTTARPICLPS 168
Query: 359 LLSTDKAGMWAVAAGYG---RYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNI 189
L + + V G+G S + PT + L T+ + Y G + L S +
Sbjct: 169 LPAVE--NRLCVVTGWGSTIEGSSLSAPTLREI-HVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 188 CTS-GVGGVGICRGDSGGPLTINHQGKEWLIGVSSFVARDGC-ELGFPSVFASVPSFRAW 15
C G + C+GDSGGPL G L GV S+ GC G P V+ +V S W
Sbjct: 226 CAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGI--GCARPGMPGVYGNVHSASTW 283
Query: 14 I 12
I
Sbjct: 284 I 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 62.9 bits (146), Expect = 2e-10
Identities = 69/244 (28%), Positives = 102/244 (41%), Gaps = 9/244 (3%)
Frame = -1
Query: 716 RIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFT 537
R+VGG P+ A L N+ CG SIL ++TAAHC F+ R +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHC-FEEDERVSSYE 81
Query: 536 VVLGTPFLFHGGLRIQASSIAVHHQYDF--RTFANDIAMLYLP-RRIIFNHAVQPIPLAT 366
VV+G Q + H Y F++DIA+L +P I FN QPI L +
Sbjct: 82 VVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 365 DSLLSTDKAGMWAVAAGYG----RYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLD 198
+ T G V +G+G RY++ + A + Y ++
Sbjct: 142 KDFVYT--PGRQCVVSGWGSMGLRYAERLQ-----AALIPIINRFDCVNSSQIYSSMSRS 194
Query: 197 SNICTSGVGGVGICRGDSGGPLTINHQ-GKEWLIGVSSFVARDGC-ELGFPSVFASVPSF 24
+ GG+ C+GDSGGP + G L GV S+ DGC + P ++ V +
Sbjct: 195 AFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISW--GDGCAQKKQPGIYTMVAPY 252
Query: 23 RAWI 12
+WI
Sbjct: 253 LSWI 256
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = -1
Query: 623 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFL---FHGGLRIQASSIAVHHQY-- 459
CGG ++ P+ ++T+AHC F G + AV V LG L G ++ ++A+ ++
Sbjct: 46 CGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAISKKFFN 105
Query: 458 DFRTFANDIAMLYLPRRIIFNHAVQPIPLATDSLLST 348
D +D+A+++LP+R H+ P+ L L ST
Sbjct: 106 DASEANDDVAVIFLPQRADVCHS--PLSLQIAKLPST 140
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 47.2 bits (107), Expect = 1e-05
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Frame = -1
Query: 728 IFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRA 549
IF RI+GG I+ L+ + CG +++ ++TAAHC + R+
Sbjct: 33 IFSFRIIGGN--SIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRS 90
Query: 548 VRFTVVLGTPFLFHGGLRIQASSIAVHHQYDFRTFANDIAMLYLPRRIIFNHAVQPIPLA 369
F V ++ + I H Y+ +T NDIA+L + + ++P+ L
Sbjct: 91 --FVYVREPKNNRERSFSVKEAYI--HSGYNNQTADNDIALLRISSDLS-KLGIKPVCLV 145
Query: 368 TDS--LLSTDKAGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISL-----ETCRGYYGN 210
D LL K G V GYG + + + LQ+ S+ + C +
Sbjct: 146 HDDSKLLKQYKNG---VVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRF 202
Query: 209 VVLDS------NICTSGVGGVGICRGDSGGPLTINHQGKEWL-IGVSSFVA--RDG-CEL 60
+ L S IC +G G GDSGGPL I+ E++ IG++S+ A DG +
Sbjct: 203 LSLLSVKITGYQIC-AGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQ 261
Query: 59 G-FPSVFASVPSFRAWIQ 9
G FP V+ + + WIQ
Sbjct: 262 GKFPGVYTRISKYVPWIQ 279
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 272 MARNVFLQTISLETCRGYYGNVVLDSNICTSGVGGVGICRGDSGGPLTINH--QGKEWLI 99
M + + L T +L TC +G + + CT+ +C GDSGG LT + +E++I
Sbjct: 232 MIQVLTLATETLATCEENWGTSIPFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFII 291
Query: 98 GVSSF 84
+ S+
Sbjct: 292 AIVSY 296
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -1
Query: 749 KQAEQHQIFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCW 570
+Q+ + G P + P+ + + + CGG+++T +LTAAHC+
Sbjct: 20 RQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCF 79
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 501 ATMEQEWGSQYDSETYCTISSIEPAMSCS*DAGRG 605
AT E+ WG+ +++CT E CS D+G G
Sbjct: 244 ATCEENWGTSIPFDSFCTAEE-EDKNVCSGDSGGG 277
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = -1
Query: 680 HPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVV 531
H YL +L +L++ + C G++L+P+ +LT++ C+ D R + ++
Sbjct: 28 HQYLVKVLTKDTKLKNISTCTGTLLSPSVVLTSSKCFPDTRKNLIAQAII 77
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 725 FMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNR 552
F ++ G A + P+ + + QS C G+I++P IL A HC F G+NR
Sbjct: 159 FSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC-FAGQNR 215
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -1
Query: 224 GYYGNVVLDSNICTSGVGGVGICRGD-----SGGPLTINHQGKEWLIGVSSFVARDGCEL 60
GY G + + + V IC +GGPL +N GK +IG+ + +R+ CEL
Sbjct: 205 GYTGESMQHRKLSITAVKDERICTDTYKTEKAGGPLILNVSGKATVIGLKAPASRENCEL 264
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = -1
Query: 674 YLAGLLIDINE-LQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGL 498
++AGL+ + L C SI C F V F + P L GG
Sbjct: 405 WMAGLVASVTSFLVFVFVCITLTWVAVSIAYVGACIFGDEGLVVTFMPMFVLPMLVFGGF 464
Query: 497 RIQASSIAVHHQY 459
+ A+SI V++QY
Sbjct: 465 YVNANSIPVYYQY 477
>AL117205-4|CAB55162.1| 441|Caenorhabditis elegans Hypothetical
protein Y116A8A.4 protein.
Length = 441
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -1
Query: 224 GYYGNVVLDSNICTSGVGGVGICRG-----DSGGPLTINHQGKEWLIGVSSFVARDGCEL 60
GY +L + V GIC + GGPL N GK +IG+ + +R+ CEL
Sbjct: 205 GYSDYDLLHHKLLIKAVKDGGICTETYYTEEVGGPLVQNVSGKATVIGLKAPGSRENCEL 264
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -1
Query: 389 VQPIPLATDSLL-STDKAGMWAVAAG 315
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -1
Query: 389 VQPIPLATDSLL-STDKAGMWAVAAG 315
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -1
Query: 389 VQPIPLATDSLL-STDKAGMWAVAAG 315
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -1
Query: 389 VQPIPLATDSLL-STDKAGMWAVAAG 315
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -3
Query: 636 ITGRVRRIDPYPCQHLNC-SSLLVRWKKSCSTFHCRTGNPIPVP 508
+ G + + DP+ + C S +W S + C NP P P
Sbjct: 1018 VQGEIAQCDPFNPPNAPCPSEFTCQWSLSNQRYQCCGSNPAPTP 1061
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 31 GTLAKTDGKPNSQPSLATNELTPMSHSFPWWLIVNGPPESPRQIPTPPTPLVQMLESKTT 210
GT + NS +++NE + S S V GPP ++I P L LE +TT
Sbjct: 446 GTSNVYGARSNSSQCISSNENSMSSTS------VEGPPAKKKRISKPKKALQSRLEKQTT 499
Query: 211 L 213
+
Sbjct: 500 I 500
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 552 CSTFHCRTGNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 439
C T HC +G+ P+ LK + FH + +S ++Q CK
Sbjct: 593 CGTLHCHSGSITPIDSSLK-AFTFHFTENSHQIQ--CK 627
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 552 CSTFHCRTGNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 439
C T HC +G+ P+ LK + FH + +S ++Q CK
Sbjct: 593 CGTLHCHSGSITPIDSSLK-AFTFHFTENSHQIQ--CK 627
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,131,100
Number of Sequences: 27780
Number of extensions: 442942
Number of successful extensions: 1390
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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