Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12f16f
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 46 2e-05
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 38 0.006
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 36 0.018
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 35 0.040
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 33 0.22
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 32 0.29
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 32 0.38
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 29 2.7
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 29 2.7
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 3.5
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 6.1
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 6.1
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 27 8.1
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 27 8.1
AF039052-11|AAF98632.1| 583|Caenorhabditis elegans Hypothetical... 27 8.1
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 47.2 bits (107), Expect = 9e-06
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +1
Query: 259 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFL---FHGGLRIQASSIAVHHQY-- 423
CGG ++ P+ ++T+AHC F G + AV V LG L G ++ ++A+ ++
Sbjct: 46 CGGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAISKKFFN 105
Query: 424 DFRTFANDIAMLYLPRRIIFNHAVQPIPLATDSLLST 534
D +D+A+++LP+R H+ P+ L L ST
Sbjct: 106 DASEANDDVAVIFLPQRADVCHS--PLSLQIAKLPST 140
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 46.0 bits (104), Expect = 2e-05
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +1
Query: 166 RIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFT 345
R+VGG P+ A L N+ CG SIL ++TAAHC F+ R +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHC-FEEDERVSSYE 81
Query: 346 VVLGTPFLFHGGLRIQASSIAVHHQYDF--RTFANDIAMLYLP-RRIIFNHAVQPIPLAT 516
VV+G Q + H Y F++DIA+L +P I FN QPI L +
Sbjct: 82 VVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 517 DSLLSTDKAGMWAVAAGYG 573
+ T G V +G+G
Sbjct: 142 KDFVYT--PGRQCVVSGWG 158
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 37.9 bits (84), Expect = 0.006
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +1
Query: 13 MRSLVFFILCFVTYTSSESSANE--EFVGW-LEKVGIKTAA--KIKQAEQHQIFMQRIVG 177
M+ +F +L V S + N+ E VG L ++ A ++ + R++G
Sbjct: 1 MKVWIFLLLVGVINKVSTDNKNDVIEKVGCGLHSTNVELAQTRSAQEPADYVTLDHRLIG 60
Query: 178 GAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 357
G+ + + P+ LL + + CGGS++ P +LTAAHC+ R R ++V +G
Sbjct: 61 GSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDR-RPTSYSVRVG 115
Query: 358 TPFLFHGGLRIQASSIAVHHQYD 426
G + +++++H Y+
Sbjct: 116 -GHRSGSGSPHRVTAVSIHPWYN 137
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 202 HPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVV 351
H YL +L +L++ + C G++L+P+ +LT++ C+ D R + ++
Sbjct: 28 HQYLVKVLTKDTKLKNISTCTGTLLSPSVVLTSSKCFPDTRKNLIAQAII 77
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 157 FMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNR 330
F ++ G A + P+ + + QS C G+I++P IL A HC F G+NR
Sbjct: 159 FSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC-FAGQNR 215
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 208 YLAGLLIDINE-LQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGL 384
++AGL+ + L C SI C F V F + P L GG
Sbjct: 405 WMAGLVASVTSFLVFVFVCITLTWVAVSIAYVGACIFGDEGLVVTFMPMFVLPMLVFGGF 464
Query: 385 RIQASSIAVHHQY 423
+ A+SI V++QY
Sbjct: 465 YVNANSIPVYYQY 477
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +1
Query: 133 KQAEQHQIFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCW 312
+Q+ + G P + P+ + + + CGG+++T +LTAAHC+
Sbjct: 20 RQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCF 79
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 381 ATMEQEWGSQYDSETYCTISSIEPAMSCS*DAGRG 277
AT E+ WG+ +++CT E CS D+G G
Sbjct: 244 ATCEENWGTSIPFDSFCTAEE-EDKNVCSGDSGGG 277
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 31.9 bits (69), Expect = 0.38
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Frame = +1
Query: 154 IFMQRIVGGAIAPINYHPYLAGLLIDINELQSPAACGGSILTPASILTAAHCWFDGRNRA 333
IF RI+GG I+ L+ + CG +++ ++TAAHC + R+
Sbjct: 33 IFSFRIIGGN--SIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRS 90
Query: 334 VRFTVVLGTPFLFHGGLRIQASSIAVHHQYDFRTFANDIAMLYLPRRIIFNHAVQPIPLA 513
F V ++ + I H Y+ +T NDIA+L + + ++P+ L
Sbjct: 91 --FVYVREPKNNRERSFSVKEAYI--HSGYNNQTADNDIALLRISSD-LSKLGIKPVCLV 145
Query: 514 TD--SLLSTDKAGMWAVAAGYG 573
D LL K G V GYG
Sbjct: 146 HDDSKLLKQYKNG---VVIGYG 164
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 493 VQPIPLATDSLL-STDKAGMWAVAAG 567
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 493 VQPIPLATDSLL-STDKAGMWAVAAG 567
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 493 VQPIPLATDSLL-STDKAGMWAVAAG 567
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 493 VQPIPLATDSLL-STDKAGMWAVAAG 567
++P+P+ TDSLL ST + G AVA G
Sbjct: 122 IEPLPITTDSLLESTIRLGQDAVAGG 147
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 246 ITGRVRRIDPYPCQHLNC-SSLLVRWKKSCSTFHCRTGNPIPVP 374
+ G + + DP+ + C S +W S + C NP P P
Sbjct: 1018 VQGEIAQCDPFNPPNAPCPSEFTCQWSLSNQRYQCCGSNPAPTP 1061
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 330 CSTFHCRTGNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 443
C T HC +G+ P+ LK + FH + +S ++Q CK
Sbjct: 593 CGTLHCHSGSITPIDSSLK-AFTFHFTENSHQIQ--CK 627
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 330 CSTFHCRTGNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 443
C T HC +G+ P+ LK + FH + +S ++Q CK
Sbjct: 593 CGTLHCHSGSITPIDSSLK-AFTFHFTENSHQIQ--CK 627
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 201 VIDWRNSSPNDALHKYLVLFRLLNL 127
++ W +S+P D H ++ LF+ L L
Sbjct: 278 IVQWVSSNPRDRQHHFVQLFKTLRL 302
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 201 VIDWRNSSPNDALHKYLVLFRLLNL 127
++ W +S+P D H ++ LF+ L L
Sbjct: 278 IVQWVSSNPRDRQHHFVQLFKTLRL 302
>AF039052-11|AAF98632.1| 583|Caenorhabditis elegans Hypothetical
protein T22D1.11 protein.
Length = 583
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 364 FLFHGGLRIQASSIAVHHQYDFRTFANDIAMLYLP--RRIIFNHAV 495
F HGG + S++ +Y F TF++ +L +P R +F+H V
Sbjct: 120 FYVHGGELVYDSAVMFEDKYLFDTFSSRDVILVIPAFRLGLFSHFV 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,541,295
Number of Sequences: 27780
Number of extensions: 347970
Number of successful extensions: 1023
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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