Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f13r
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    46   2e-05
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    42   4e-04
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    35   0.066
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    33   0.20 
AL023842-4|CAA19517.2|  229|Caenorhabditis elegans Hypothetical ...    31   0.62 
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    29   3.3  
Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
 Frame = -1

Query: 714 GSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGT 535
           G++ + GA+  +A LV    NG+  +CGA+++ +   VTAAHC      Q R F      
Sbjct: 41  GNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC--ALQLQTRSFVYVREP 97

Query: 534 ANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQRINLA---SXXXXXX 364
            N  +     +    ++H  YN    +ND+A++  +       I+ + L    S      
Sbjct: 98  KN--NRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKLLKQY 155

Query: 363 XXXXXXXXXGRTSDAASG----ANNQQKRQVSLQVITNAVCARTYG-----NSVIIGSTL 211
                        + +SG     N+Q  +  S+ +I++  C +T+      +  I G  +
Sbjct: 156 KNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQI 215

Query: 210 CVSGANGRSTCXXXXXXXXXXXXXXGRQL-IGITSFGSD--RGC--QRGYPAGFARVTSF 46
           C +GA    T               G  + IGITS+G+D   G   Q  +P  + R++ +
Sbjct: 216 C-AGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKY 274

Query: 45  NSWIRARI*MTT 10
             WI+  I  T+
Sbjct: 275 VPWIQGVIGKTS 286


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 6/233 (2%)
 Frame = -1

Query: 714 GSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTLAFGT 535
           GS ++  + P    L+  L + R   CG SL+     +TAAHC+  ++ +   +++  G 
Sbjct: 61  GSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHCF-AKDRRPTSYSVRVGG 116

Query: 534 ANIFSGGTRVTTSSVHLHGSYNMNNLNN-DVAIIN-HNHVGFNNNIQRINLASXXXXXXX 361
               SG     T +V +H  YN+   ++ D AI+  H  V  +   + I L S       
Sbjct: 117 HRSGSGSPHRVT-AVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENR 175

Query: 360 XXXXXXXXGRTSDAASGANNQQKRQVSLQVITNAVCAR--TYGNSVIIGSTLCVSGANGR 187
                     ++   S  +    R++ + +++   C+    Y   + + S LC   + G+
Sbjct: 176 LCVVTGWG--STIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGK 233

Query: 186 -STCXXXXXXXXXXXXXXGRQLIGITSFGSDRGCQR-GYPAGFARVTSFNSWI 34
             +C                +L G+ S+G   GC R G P  +  V S ++WI
Sbjct: 234 IDSCQGDSGGPLMCARDGHWELTGVVSWGI--GCARPGMPGVYGNVHSASTWI 284


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 34.7 bits (76), Expect = 0.066
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
 Frame = -1

Query: 696 GAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW-RTRNAQARQFTLAFGTANIFS 520
           GA P  A L    T      CGAS+L  T  +TAAHC+       + +  +     N   
Sbjct: 36  GAFPWTAALRNKATKAHH--CGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTD 93

Query: 519 GGTRV-TTSSVHLHGSYNMNNLNNDVAIINHNHVG--FNNNIQRINLAS 382
           G  ++     +H +  Y  +  ++D+AI+   + G  FN   Q I L S
Sbjct: 94  GNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICLPS 141


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -1

Query: 714 GSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 586
           G +AN+     LA ++    +G T++CG  L+  +  +T+AHC
Sbjct: 20  GFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62


>AL023842-4|CAA19517.2|  229|Caenorhabditis elegans Hypothetical
           protein Y44A6D.3 protein.
          Length = 229

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -1

Query: 522 SGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQ 400
           +   R+   S H  G   +NN+NN+    NHNH   NNNIQ
Sbjct: 68  AAAARLNAQSSHSSGPARLNNMNNN-NNNNHNH-SKNNNIQ 106


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -1

Query: 711 SAANAGAHPHLAGLVIAL-TNGRTS----ICGASLLTNTRSVTAAHCWR 580
           +A N G   HLA   + +    R      ICG +L+T    +TAAHC++
Sbjct: 32  AAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCFQ 80


>Z81479-3|CAB03942.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.3 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 499 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 585
           GG PG AG+  S     G+    G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220


>Z81479-2|CAB03941.1|  283|Caenorhabditis elegans Hypothetical
           protein C34F6.2 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 499 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 585
           GG PG AG+  S     G+    G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.131    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,905,975
Number of Sequences: 27780
Number of extensions: 197367
Number of successful extensions: 499
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)