Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12f12f
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 64 8e-11
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 59 2e-09
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 55 4e-08
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 53 2e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 49 2e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 48 3e-06
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 46 1e-05
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 42 2e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 3e-04
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 41 5e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 40 9e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 39 0.003
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 38 0.004
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.008
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.019
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.019
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.034
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 35 0.034
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 35 0.034
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.044
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 35 0.044
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 35 0.044
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.044
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.059
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.14
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.24
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 31 0.72
SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 29 2.2
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_26962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_49131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_1810| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 28 5.1
SB_609| Best HMM Match : tRNA-synt_1 (HMM E-Value=2.2e-09) 27 6.7
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_14573| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_3780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 27 8.9
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 63.7 bits (148), Expect = 8e-11
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNW-NQWWQSCGGNILNQRSILSAAHC-PYGDATGRWR 266
RI+GG+ +P ++ Y N + CGG+++ I++AAHC Y +
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKDYT 162
Query: 267 IRVGSTFANSGGVVH---NVNRIIIHPNYN-RRTADSDLCILRSNSNIAYNNNVRPINIA 434
I VG N+ +V RII+HP Y D D+ +++ S + YN+ VRP+ +
Sbjct: 163 IAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLP 222
Query: 435 GANYNLGDNQVVWAAGWG 488
+L +N + +GWG
Sbjct: 223 SLKEDLEENTQCYISGWG 240
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 62.9 bits (146), Expect = 1e-10
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+T +P A L Y +N N + CGG +++ R +++A+HC + TG +R
Sbjct: 248 RIVGGTTAQRGAWPWQAMLRY-YNGNHF---CGGTLVHPRWVVTASHCVHKLTTGDLYVR 303
Query: 273 VGSTF--ANSGGVV-HNVNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPINIAGA 440
+G+ + +G + RI +HPNY+ +D+ +L + + +A
Sbjct: 304 MGAHWKDGKTGSEQDFRIQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLACLAPR 363
Query: 441 NYNLGDNQVVWAAGWGATSLGG 506
+ L D W +GWG S GG
Sbjct: 364 SSPLPDGTRCWISGWGRLSSGG 385
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 60.9 bits (141), Expect = 6e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +3
Query: 96 IIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIRV 275
I+GG+ ++P ++ N + CGGN+++ +L+AAHC + ++ +
Sbjct: 546 IMGGANAEHGEWPWQVSMKL--NSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTM 603
Query: 276 GS-TFANSGGV--VHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANY 446
G N G V V RII H NY+ T D D +L+ + + V+P+ + +++
Sbjct: 604 GEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDF 663
Query: 447 NLGDNQVVWAAGWGATSLGG 506
G + + GWG+T+ G
Sbjct: 664 PAG--TLCYVTGWGSTNYRG 681
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 59.3 bits (137), Expect = 2e-09
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Frame = +3
Query: 90 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRI 269
+RI+GG + I Q+P + A++ Q+CGG+++ + I++AAHC + RWR+
Sbjct: 39 RRIMGGQRSTIEQHPWMVAMMLDSA-----QACGGSLVPEDWIVTAAHC-FDSNRLRWRV 92
Query: 270 RVGSTFANSGGVVHNVNRIIIHPNYNRRTA-------DSDLCILRSNSNIAYNNNVRPIN 428
G+ + V+ I HP Y A D D+ +++ ++A PI
Sbjct: 93 VAGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVPIC 152
Query: 429 IAGANYNLGDNQVVWAAGWGATSLGG 506
+ + + + AGWG S GG
Sbjct: 153 LVPRDTPRDLKRDCYVAGWGRRSFGG 178
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 54.8 bits (126), Expect = 4e-08
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +3
Query: 180 QSCGGNILNQRSILSAAHC-PYGDATGRWRIRVGSTFA---NSGGVVHNVNRIIIHPNYN 347
Q CGG ++ +L+AAHC W ++VG + + G ++ I +HP YN
Sbjct: 1264 QRCGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYN 1323
Query: 348 RRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSL 500
+ + DL +L+ +N+ V PI I AN + + AGWG + L
Sbjct: 1324 SSSHEHDLAVLQLQQPAEFNSRVSPICIV-ANEEVQAGRACAVAGWGQSYL 1373
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.8 bits (126), Expect = 4e-08
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ +P A L N Q CGG +++ + +++AAHC Y ++IR
Sbjct: 139 RIVGGTKAPPGAWPWQAML----RSNYGGQFCGGTLVHPQWVITAAHCVYRRGPNDFKIR 194
Query: 273 VGSTFANSG-GVVH--NVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGA 440
+G+ F G +++R+I HP+Y++ T + D+ ++ N V +A
Sbjct: 195 MGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPAVINKAVGLACLADP 254
Query: 441 NYNLGDNQVVWAAG 482
++ + D + W G
Sbjct: 255 SFPIDDGKKCWVTG 268
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 54.8 bits (126), Expect = 4e-08
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Frame = +3
Query: 78 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC--PYGDA 251
P +R++GG Q+P ALL+ Q CGG ++++R +++ AHC PY
Sbjct: 23 PRRFRRVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHCFNPYTSE 77
Query: 252 TGR-WRIRVGS---TFANSGGVVHNVNRIIIHPNYNRRTADS--------DLCILRSNSN 395
R W + +G S V I +H +Y + D+ ++ +
Sbjct: 78 DPRDWNVTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRP 137
Query: 396 IAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGG 506
+ +N +V+PI I N + N + +GWG T G
Sbjct: 138 VVFNFHVQPICIMRPNISFKWNTACFISGWGHTRWNG 174
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 54.4 bits (125), Expect = 5e-08
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ IN +P A LL + N +Q+ CGG++++ +L+AAHC G+ +
Sbjct: 29 RIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVGEQPDSALLG 85
Query: 273 VGSTFANSGGVVHNVN--RIIIHPNYNRR-TADSDLCILRSNSNIAYNNNVRPINIAGAN 443
+ G ++ +II H NY+ +D+ +L+ + N V + +A N
Sbjct: 86 AHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLANNN 145
Query: 444 YNLGDNQV--VWAAGWGATSLGG 506
+L ++ + GWG+ S GG
Sbjct: 146 THLPVDEFGKCYITGWGSLSSGG 168
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 52.8 bits (121), Expect = 2e-07
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCP--YGDATG--R 260
RII GS N +P + + N+N CGG +++ + +++AAHC D
Sbjct: 351 RIISGSDAQPNSWPWMVQI----NYNNG-HHCGGTLVSPQWVVTAAHCVDHVKDPKNYNE 405
Query: 261 WRIRVGS--TFANSGGVVH-NVNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPIN 428
I +G A+ G +V RII+HP Y TA ++D+ +++ N N V
Sbjct: 406 LAITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLAC 465
Query: 429 IAGANYNLGDNQVVWAAGWGATSLGG 506
+ L D ++ +A GWG T +GG
Sbjct: 466 LPRQGEELSDGKICYATGWGLT-VGG 490
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 51.6 bits (118), Expect = 4e-07
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Frame = +3
Query: 78 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDAT- 254
P R+IGG +P AL N+ CGG++++ +++AAHC +
Sbjct: 471 PITQSRVIGGKDAIPGAWPWQIALKSRGNF-----ICGGSLVSSTWVVTAAHCVARSSNP 525
Query: 255 GRWRIRVGSTFANSGGVVH---NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 425
+++I VG N V NV ++I HP YN +D+ ++ S ++ V P+
Sbjct: 526 AQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPV 585
Query: 426 NIAGANYNL 452
+ Y L
Sbjct: 586 CLPPHGYKL 594
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD-ATGRWRI 269
RIIGG+T + +P A +L + W CGG +++ +++AAHC + + ++I
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVD-KSWNHRCGGTLIDTEWVVTAAHCVFQNIEPSNYKI 342
Query: 270 RVGS--TFANSGGVVHNVNRIIIHPNY-NRRTADSDLCILRSNSNIAYNNNVRPINIAGA 440
++G+ ++ G + V I +H + + D+ I++ + + + P + G
Sbjct: 343 KLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPGL 402
Query: 441 NYNLGDNQVVWAAGWGATSLG 503
+ + + GWG T G
Sbjct: 403 YDQVTSGTMCYVTGWGMTEYG 423
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GGST +P L+Y N Q CGG ++ +++AAHC ++R
Sbjct: 630 RIVGGSTAPPGAWPWQVMLIY----NSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 273 VGSTFANSGG----VVHNVNRIIIHPNY-NRRTADSDLCILRSNSNIAYNNNVRPINIAG 437
+G+ S + ++ I HP+Y + + + +D+ +LR + + + +
Sbjct: 686 LGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPN 745
Query: 438 ANYNLGDNQVVWAAGWGATSLGG 506
+ + + + GWG S GG
Sbjct: 746 DTVHFPNGTMCYITGWGTLSSGG 768
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 50.4 bits (115), Expect = 8e-07
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Frame = +3
Query: 90 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC---PYGD--AT 254
QRI+GG T YP + + +CGG++++++ +L+AAHC G+
Sbjct: 106 QRIVGGHDTVKGAYPWHVLIRKGGH-----VACGGSLISEKWVLTAAHCVTHRNGNILPR 160
Query: 255 GRWRIRVG---STFANSGGV-VHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRP 422
R+++++G +T N V + N++ I HP ++ D+DL +++ + + VRP
Sbjct: 161 SRFQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRP 220
Query: 423 INIAGANYN---LGDNQVVWAAGWGAT 494
I + + + ++ A GWG T
Sbjct: 221 ICLPETDDQASLISPSKFGMAVGWGKT 247
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR 260
++ RI+GG+ N +P A L T + CGG++++ +L+AAHC
Sbjct: 386 SSTSRIVGGAAANPGDWPWQAQLRTTTGFPY----CGGSLIHSNWVLTAAHCISSKRPAE 441
Query: 261 WRIRVGSTFANSGGVVHN-----VNRIIIHPNYNRRTADSDLCILR 383
+R+G+ + G + + V+ II H NYN RT +D+ +L+
Sbjct: 442 VVVRLGA-HSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALLK 486
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 48.4 bits (110), Expect = 3e-06
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +3
Query: 186 CGGNILNQRSILSAAHCPYGDA-TGRWRIRVGSTFANSG-GV--VHNVNRIIIHPNYNRR 353
CGG++++ +++AAHC G + T +++ G NS G H+V RII HP YN
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNSP 152
Query: 354 TADSDLCILRSNSNIAYNNNVRPINIAGANYNLG 455
+D+ ++ +S + ++ +++ + G
Sbjct: 153 QLSNDIALIELSSPVPLSDRGHQVSVGSKCFITG 186
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ +P A L T + CGG++++ + +L+A HC IR
Sbjct: 663 RIVGGTAAKQGDWPWQAQLRST----SGFPFCGGSLIHPQWVLTATHCVSSRRPTDLNIR 718
Query: 273 VG--STFANSGGVVH-NVNRIIIHPNYNR 350
+G + AN G V +II+HP Y +
Sbjct: 719 LGAHNRRANLGMEQDIKVEKIIMHPGYRK 747
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 47.6 bits (108), Expect = 6e-06
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +3
Query: 186 CGGNILNQRSILSAAHCPY-GDATGRWRIRVGSTFANSGGVVHNVNRIIIHPNY-NRRTA 359
CGG++L+ +L+AAHC T + + VG+ G H ++ H Y +
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKDK 399
Query: 360 DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATS 497
DL ++R A++ V P+ + LG+ + + GWG S
Sbjct: 400 KHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKNCYTTGWGRVS 445
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ ++P A L++ + Q CGG ++++ +++A+HC ++
Sbjct: 210 RIVGGNDAMHGEWPWQAMLMFQTPLG-YKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 273 VGSTFA-NSGGVVH-----NVNRIIIHPNYNR--RTADSDLCILRSNSNIAYNNNVRPIN 428
+ S N G++ + +I +H +YN ++D+ ++R V+P+
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVC 328
Query: 429 IAGANYNLGDNQVVWAAGWGATSLGG 506
+A + W GWG GG
Sbjct: 329 LADGTVSFPPGTECWITGWGRLHSGG 354
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRW--- 263
RI+GG T + +P A L + CGG+++N+ +++AAHC + R
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTI---VCGGSLINREWVVTAAHCIDRNNPSRTGCV 488
Query: 264 ------RIRVGST--FANSGGVVH-NVNRIIIHPNYNRRTADSDLCILRSNSNI-AYNNN 413
R+ +G + + G +H +V +I IHP+Y+ +DL ++R + I + +
Sbjct: 489 VPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKH 548
Query: 414 VRPI 425
VRP+
Sbjct: 549 VRPV 552
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Frame = +3
Query: 135 GIAALLYTWNWNQWWQS------CGGNILNQRSILSAAHCPYGDATGRWRIRVG----ST 284
G A L W W W CGG+++ + +L+A HC + ++R+ +G T
Sbjct: 65 GDDATLGEWPWQAWLHVTPHGFVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLGDVDRDT 124
Query: 285 FANSGGVVHNVNRIIIHPNYNRRTA-DSDLCILR 383
S + H V RII HP+Y+R D+D+ +L+
Sbjct: 125 TEGSEQIFH-VRRIIKHPHYSRDVPYDNDVALLQ 157
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD---ATGRW 263
RI+GG +P +AA+ ++ CGG ++ + +++AAHC Y D
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVKGSFR-----CGGALIARDWVVTAAHCFYYDGKIVPSDI 777
Query: 264 RIRVGSTFAN-SGGVVHNV--NRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIA 434
+R+G G NV + +++HP N+ D D+ +++ + VR + +
Sbjct: 778 LVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYVRTVCLP 837
Query: 435 GAN--YNLGDNQVVWAAGWGATSLG 503
+ V AGWG+T G
Sbjct: 838 QPTDAILVRPGSVGIVAGWGSTQKG 862
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Frame = +3
Query: 78 PTNPQR--IIGGSTTNINQYPGIAALLY-TWNWNQWWQSCGGNILNQRSILSAAHC-PYG 245
PTN +R I GGS + YP AL + T+ N CGG ++ + +L+AAHC Y
Sbjct: 1153 PTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYK 1212
Query: 246 DATGRW---RIRVGSTFANSGGVVHNVN-----RIIIHPNYNRRTADSDLCILRSNSNIA 401
D+ + R+ +G + + +V I HP ++ RT DSD+ ++R
Sbjct: 1213 DSGIPYHGLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWRTYDSDIALIRLRWKAN 1272
Query: 402 YNNNVRPI 425
VRP+
Sbjct: 1273 ITEYVRPV 1280
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 315 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 494
V ++I+HPNY R+T DSD+ +LR + N V I + + + + GWG T
Sbjct: 1405 VRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGRT 1464
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDAT-GRWRI 269
RII G + +P +L + +CGG++++ R +++AAHC + + G + +
Sbjct: 105 RIINGQNAQPHSWPWQISL----RGRSGFHTCGGSLISDRWVVTAAHCIHRNKNPGGYTV 160
Query: 270 RVGSTFANSGGVVH---NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNN 410
VG+ V +++II HP YN R +D+ +L + + +++
Sbjct: 161 VVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDS 210
Score = 35.1 bits (77), Expect = 0.034
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 10/143 (6%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC------PYGDAT 254
RII G + +P +L + +CGG++++ R +++AA P G
Sbjct: 428 RIINGQNAQPHSWPWQISL----RGRSGFHTCGGSLISDRWVVTAAQGIHRNKNPGGRQN 483
Query: 255 -GRWRIRVGSTFANSGGVVHN---VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRP 422
G + + VG+ V +++II HP YN R +D+ +L + + +++ +
Sbjct: 484 PGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKV 543
Query: 423 INIAGANYNLGDNQVVWAAGWGA 491
+ + + + GWGA
Sbjct: 544 GTVCLTDQRPAPGKRCYITGWGA 566
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Frame = +3
Query: 78 PTNPQRIIGGSTTNINQYPG-IAALLYTWNWNQWWQSCGGNILNQRSILSAAHC--PYGD 248
P RI+GG N +P + +L T N + CGG++++ IL+++HC Y +
Sbjct: 240 PPPESRIVGGREAPRNSWPWQVEIILKTPNLTTHY--CGGSLIDPYWILTSSHCFWTYNN 297
Query: 249 ATGRWRIRVGSTFANSGGVVHNV---NRIIIHPNY----NRRTADSDLCILRSNSNIAYN 407
+ ++ IR+G + +++ IHP D D+ +++ ++
Sbjct: 298 ISTQFEIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPAVFH 357
Query: 408 NNVRPINIAGANYNLGDNQVVWAAGWGATSLG 503
V + + NL + GWG T+ G
Sbjct: 358 KCVYSVCLPSVTANLTTGTKCYVTGWGKTAEG 389
Score = 34.7 bits (76), Expect = 0.044
Identities = 24/118 (20%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = +3
Query: 183 SCGGNILNQRSILSAAHC----PYG-DATGRWRIRVG----STFANSGGVVHNVNRIIIH 335
+CGG++++++ ++++ HC PY + R+G ST ++ ++ IH
Sbjct: 560 NCGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIKG-EKLFIH 618
Query: 336 PNYN----RRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATS 497
P Y T D D+ +++ + V + + +++ D + GWG T+
Sbjct: 619 PKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGRTA 676
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Frame = +3
Query: 186 CGGNILNQRSILSAAHC-----PYGDATGRWRIRVGSTFANSGGVVHNV-NRIIIHPNY- 344
CGG+I++ +++A HC P T R + G + + +RI +HP +
Sbjct: 10 CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFV 69
Query: 345 ---NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSL 500
D+ +L I +++ ++PI + + ++ + GWG T L
Sbjct: 70 IGGVSHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYLTGWGETVL 124
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Frame = +3
Query: 90 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC---PYGDA-TG 257
+RI+GG ++ +P ALL Q C G+++ R I++A HC P A
Sbjct: 52 KRIVGGVVSSEGLWPWQVALLLNDR-----QVCAGSLIEARWIITAGHCFKDPRSSADPD 106
Query: 258 RWRIRVGSTFANSG----GVVHNVNRIIIHPNYNRRTADSD 368
+W++ +G +S V RII+HP +N + + D
Sbjct: 107 KWKVLLGERRRHSSKRHFERAQQVKRIIVHPKFNGKFVNGD 147
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 41.9 bits (94), Expect = 3e-04
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ +P A L T + CGG+++ + IL+A HC IR
Sbjct: 10 RIVGGTAAKHGDWPWQAQLRTT----SGFPYCGGSLIAPQWILTATHCVERKQASSIVIR 65
Query: 273 VGS--TFANSGGVV-HNVNRIIIHPNYNR-RTADSDLCILRSNSNIAY 404
+G+ A G + V ++I HP+Y++ +T D+ +L+ + + Y
Sbjct: 66 LGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALLKLDKPVLY 113
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 315 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 494
V RII H NY+ T D D +L+ + + V+P+ + +++ G + + GWG+T
Sbjct: 371 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAG--TLCYVTGWGST 428
Query: 495 SLGG 506
+ G
Sbjct: 429 NYRG 432
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 41.1 bits (92), Expect = 5e-04
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 13/146 (8%)
Frame = +3
Query: 90 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWR- 266
Q+I+GG T +P + Y CGG+I+N + I++AAHC G R
Sbjct: 1781 QQIVGGKVTEHGAWPWQVQIGY----KTMGHICGGSIVNSQWIVTAAHCVTTKPPGASRY 1836
Query: 267 ---------IRVGS-TFANSGGVVHN--VNRIIIHPNYNRRTADSDLCILRSNSNIAYNN 410
+ +G G N + I++HP+YN D D+ +L+ I +N
Sbjct: 1837 TMYAFSDLNVTLGEHQLYQLDGSEQNIPIEGIVVHPSYN--DLDYDIALLKLRQPITFNA 1894
Query: 411 NVRPINIAGANYNLGDNQVVWAAGWG 488
V + + A G + +GWG
Sbjct: 1895 YVSQVCLPQAALLAG--TPCYVSGWG 1918
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 40.7 bits (91), Expect = 7e-04
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Frame = +3
Query: 87 PQ-RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC----PYG-D 248
PQ RI+GG + N +P L+ N +CGG++++++ ++++ HC PY
Sbjct: 246 PQPRIVGGREASPNSWPWQVDLVV----NGTRHNCGGSLIDKQWVVTSGHCFDQRPYAYI 301
Query: 249 ATGRWRIRVG----STFANSGGVVHNVNRIIIHPNYN----RRTADSDLCILRSNSNIAY 404
+ R+G ST ++ ++ IHP Y T D D+ +++ +
Sbjct: 302 PLSYYEFRLGEHRESTTEGWEEIIKG-EKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVF 360
Query: 405 NNNVRPINIAGANYNLGDNQVVWAAGWGATS 497
V + + +++ D + GWG T+
Sbjct: 361 YKRVHSVCLPEKSWSPPDGAGCYVTGWGRTA 391
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Frame = +3
Query: 186 CGGNILNQRSILSAAHC--PYGDATGRWRIRVGSTFANSGGVVHNV---NRIIIHPNY-- 344
CGG++++ IL+++HC Y + + ++ IR+G + +++ IHP
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPGLVV 74
Query: 345 --NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLG 503
D D+ +++ ++ V + + NL + GWG T+ G
Sbjct: 75 GDLISPGDYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEG 129
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 315 VNRIIIHPNYNRR-TADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 491
V+++I+HP+Y + T D+ +L+ + NNNV + + D W GWG
Sbjct: 187 VSKVILHPSYGKPVTLAHDIALLKLEKSATVNNNVHTVCLPFNGPAPSDCTHCWITGWGH 246
Query: 492 TSLGG 506
+ GG
Sbjct: 247 LASGG 251
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/147 (19%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
Frame = +3
Query: 78 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDAT- 254
P R++ G + +P +L CGG+++ + +++AAHC + T
Sbjct: 26 PYGTSRVVNGDNAQQHSWPWQISLRVNGR-----HICGGSLIAKDWVVTAAHCVDRNPTP 80
Query: 255 GRWRIRVGSTFANSGGVVHN---VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 425
+ + VG+ V N + ++ H ++ R +D+ +L+ + + ++ V +
Sbjct: 81 SGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTV 140
Query: 426 NIAGANYNLGDNQVVWAAGWGATSLGG 506
+ + + GWG T GG
Sbjct: 141 CLPSSGSRAQAGARCYITGWGRTVGGG 167
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 276 GSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINI--AGANYN 449
G+ + G +++I HP ++ TAD D+ ILR ++ + ++V I + GA +
Sbjct: 21 GAHYREHDGKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQGARAS 80
Query: 450 LGDNQVVWAAGWG 488
LG N + +GWG
Sbjct: 81 LGGN--CFISGWG 91
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ N +P A L + CGG +++ R +++A+HC RIR
Sbjct: 23 RIVGGTAAPKNAWPWQAQLRSA----SGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 273 VGS-TFANSG-GVVHN--VNRIIIHPNY-NRRTADSDLCILRSNSNIAYNNNVRPINIA 434
+G+ A SG V + V RII H Y N +D+ ++ N R +N+A
Sbjct: 79 LGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLN---RAVNLA 134
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 38.3 bits (85), Expect = 0.004
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDAT-GRWRI 269
R+I G + +P +L + CGG++++ +L+AAHC G R+ +
Sbjct: 37 RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIRNPRRYSV 96
Query: 270 RVGSTFANSGGVVH---NVNRIIIHPNYNRRTADSDLCILRSNSNIAYN-NNVRPINIAG 437
VG+ + V ++++I H Y+ SD+ +++ + AY + P A
Sbjct: 97 YVGAHELDGTTQVEEKISISKIYSHEKYSSSLLTSDVALIKLSK--AYRVSKSNPAKQAE 154
Query: 438 ANY 446
+NY
Sbjct: 155 SNY 157
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 37.1 bits (82), Expect = 0.008
Identities = 25/142 (17%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Frame = +3
Query: 90 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWR 266
+R++ GS +P LL + + + CGG ++++ +++AAHC + + ++
Sbjct: 42 KRVVSGSEVEPQSWPWQVHLLQSRD-GSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYK 100
Query: 267 IRVGS---TFANSGGVVHNVNRIIIHPNY-NRRTADSDLCILRSNSNIAYNNNVRPINIA 434
+ +G +V+ + +H + + D+ +L+ + N VR + +
Sbjct: 101 VILGDFNRDIKEPTEQEFDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTVCLP 160
Query: 435 GANYNLGDNQVVWAAGWGATSL 500
+ + + GWG T++
Sbjct: 161 AQGSRALEGTMCFITGWGKTNI 182
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.9 bits (79), Expect = 0.019
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 93 RIIGGSTTNINQYPG-IAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 242
RI+GG+ +P + + + NQ Q CGG ++N+ +L+AAHC Y
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQM-QICGGALINREWVLTAAHCFY 175
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +3
Query: 135 GIAALLYTWNWNQWWQS------CGGNILNQRSILSAAHCPYGDATGRWRIRVG 278
G ALL W W W CGG+++ +L+AAHC D ++++ +G
Sbjct: 35 GSEALLGEWPWQAWLHLQHTGFICGGSLVAPGWVLTAAHCILSDDASKYKVVLG 88
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 35.1 bits (77), Expect = 0.034
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC-PYGDATG 257
T P RI+ G + +P + Y + CG ++L L+AAHC D
Sbjct: 236 TPPLRIVNGEDAVPHSWPWQLSFRYKGS-----HICGASLLTPGWALTAAHCLTLSDDAS 290
Query: 258 RWRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 425
+ + G+ + G V +++I H ++ +D+ +L+ ++ + ++ V I
Sbjct: 291 DYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTI 346
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 35.1 bits (77), Expect = 0.034
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 96 IIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC-PYGDATGRWRIR 272
IIGG+ + ++P +L T + CGG +L +L+AA C G W++
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLT----HYGPVCGGTLLTSEWVLTAARCFRDNKRAGEWKVI 313
Query: 273 VGST 284
+G T
Sbjct: 314 LGET 317
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 35.1 bits (77), Expect = 0.034
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+GG+ N +P A L T + CGG++++ + IL+A HC G + IR
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRTT----SGFPYCGGSLIHPQWILTATHCVSGKSASSIVIR 108
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 34.7 bits (76), Expect = 0.044
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 IHPNYNRRTADSDLCILRSNSNIAYNNNVRPINI--AGANY-NLGDNQVVWAAGWGATSL 500
IHP+Y+ + DSD+ ++R + + + V+PI + A ++Y L N +GWG L
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKL 257
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.7 bits (76), Expect = 0.044
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
RI+GG+ +N +P A+L + +Q+ CGG++++ +L+AAHC
Sbjct: 259 RIVGGTEAPVNGWPW-QAMLRSAGGSQF---CGGSLIHPEWVLTAAHC 302
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 34.7 bits (76), Expect = 0.044
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Frame = +3
Query: 135 GIAALLYTWNWN-----QWWQSCGGNILNQRSILSAAHCPY-GDATGRWRIRVGSTFANS 296
G A+ ++W W + CGG++L+ +L+AAHC + + + + VG+
Sbjct: 34 GDEAVPHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHCVIRSNNSADYTVIVGAHKRVL 93
Query: 297 GGVVHNVNRIIIHPNY-NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVW 473
G H ++ H Y + DL +++ ++ V P+ + + + + +
Sbjct: 94 DGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKPATFSTKVSPVCLPKQGDLMKERENCF 153
Query: 474 AAGWGA 491
A G A
Sbjct: 154 ATGKSA 159
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.7 bits (76), Expect = 0.044
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
RI+GG+ +N +P A+L + +Q+ CGG++++ +L+AAHC
Sbjct: 219 RIVGGTEAPVNGWPW-QAMLRSAGGSQF---CGGSLIHPEWVLTAAHC 262
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 34.3 bits (75), Expect = 0.059
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RI+ G + +P IA+L + +CG ++ ++AAHC ++ +
Sbjct: 325 RIVNGQEAVSHSWPWIASLR---KGRSNYHTCGATLIRPGWAITAAHCVM--RPDKYTVI 379
Query: 273 VGSTFAN-SGGVVHN--VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGAN 443
VGS + S N V R+ H ++ D+ +L + N+ V +
Sbjct: 380 VGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTACLPSGE 439
Query: 444 YNLGDNQVVWAAGWG-ATSLG 503
+G + + AGWG SLG
Sbjct: 440 PKVG--AICYIAGWGRLQSLG 458
Score = 28.7 bits (61), Expect = 2.9
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 177 WQSCGGNILNQRSILSAAHC 236
+ SCGG +++ R +++A+HC
Sbjct: 53 YHSCGGTLISDRWVVTASHC 72
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 33.9 bits (74), Expect = 0.077
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 291 NSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVV 470
N+ ++ N N III+ N N I+ +N+ I NNN+ INI N N+ N ++
Sbjct: 394 NNNNIIINNNNIIINNNINNNNI-----IINNNNIIIINNNIININIIINNNNIIINNII 448
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
T +RI+GG + +P AAL N CGG+++ + +++AAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL----NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 33.1 bits (72), Expect = 0.14
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 5/144 (3%)
Frame = +3
Query: 90 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY----GDATG 257
+RI+GG +P ALL Q CGG+++N+ +++A HC + T
Sbjct: 52 KRIVGGVEAAPGAWPWQVALLMNGT-----QFCGGSLVNENWVVTARHCFHELWSSMDTA 106
Query: 258 RWRIRVGS-TFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIA 434
W +G S G + + ++ +RT + + +LR + V PI +
Sbjct: 107 SWTASLGEHHLVTSEGFEQSSRSNAL--SFTQRT--TWITLLRLAKPAKLDEYVSPICLL 162
Query: 435 GANYNLGDNQVVWAAGWGATSLGG 506
+ + + GWG T G
Sbjct: 163 PDGFEFPWAKECYITGWGKTEFEG 186
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 32.3 bits (70), Expect = 0.24
Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +3
Query: 186 CGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTAD 362
CGG+++ +L+AAHC RI+ S + ++ H +++
Sbjct: 106 CGGSLITPEWVLTAAHCVEDFPHPSAHRIKERSAIQQE----FRLTKLFKHKDFSMSHLK 161
Query: 363 SDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGG 506
+D+ +L+ ++ I ++ V + + N + GWG GG
Sbjct: 162 NDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGG 209
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 135 GIAALLYTWNWNQW-----WQSCGGNILNQRSILSAAHC 236
G AA Y+W W SCGG +++ + +++AAHC
Sbjct: 480 GEAARPYSWPWQVSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 78 PTNPQRIIGGSTTNINQYPGIAALLYTW 161
PTN RI+G S T Q+ G A L TW
Sbjct: 520 PTNATRIVGESHTVTCQFQGSPAPLVTW 547
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 29.1 bits (62), Expect = 2.2
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDAT-GRWRI 269
RII G N +P +L + N CG ++L+ L+AAHC + + +
Sbjct: 85 RIINGEEAVPNSWPWQLSLRVYGSHN-----CGASLLSPGWALTAAHCVQRSSNPADYTL 139
Query: 270 RVGS--TFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 425
G+ ++ V V+++I H ++ +D+ +LR ++ + ++ + I
Sbjct: 140 AAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDKIGTI 193
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 28.7 bits (61), Expect = 2.9
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Frame = -3
Query: 434 SNINRTNVVVISYVGITA*DAEVTV-SSTSVIVGMNDNS-VHVMHNTPTVGKGGTNTNTP 261
SN N + V ++ A VTV +S+S N NS + N+ + +N+N
Sbjct: 530 SNSNSNSTVTVTVTATATATATVTVHNSSSSSSNSNSNSNSNSNSNSNSNSNSNSNSNRT 589
Query: 260 TACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGILVNVGRGA 105
+VTV T + T ++ V+ T + + ++V V A
Sbjct: 590 VTATVTV-TATVTATATVTATVTVTATATATVTVTVTATVTVTVIVTVKAAA 640
>SB_26962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Frame = -3
Query: 335 MNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPC 156
M D+ + +G S WT+ GTK + D T C
Sbjct: 1 MRDDGLWWFDQLSAIGDEQNPAANSDMISPLFWTMPGTKVKVTRSDDPTHTPLLVTTGDC 60
Query: 155 IQQSSYTGILVNVGRGATN-NPLWVGRNSRHS 63
+ + G+L++ G + WV RHS
Sbjct: 61 LGGKTMRGLLMSFGNTRRDGTDSWVSDQCRHS 92
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 248
RII G + +P +L + + CGG +++ R +++A+HC + D
Sbjct: 845 RIINGQNAQPHSWPWQISL----RQGRRFHLCGGALISDRWVVTASHCIHDD 892
>SB_49131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Frame = -3
Query: 335 MNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPC 156
M D+ + +G S WT GT+ + D T C
Sbjct: 183 MRDDGLWWFDQLSAIGDEQNPAANSDMISPVFWTKCGTEIKVTRSDDPTHTPLLVTTGDC 242
Query: 155 IQQSSYTGILVNVGRGATN-NPLWVGRNSRHS 63
+ + G+L++ G N WV RHS
Sbjct: 243 LGGKTMRGLLMSFGNTRRNGTDSWVSDQCRHS 274
>SB_1810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.9 bits (59), Expect = 5.1
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = -3
Query: 506 PSERCSTPTSSPNNL--VITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGM 333
P E + TS P + V T ++ ++ TN+ +Y T+ E+ STS +V +
Sbjct: 11 PCETYTVSTSFPGEIYTVSTSFLVEIYTVS-TNIPCETYTVSTSFPGEIYTVSTSFLVEI 69
Query: 332 NDNSVHVMHNTPTVGKG--GTNTNTPTACSVTVWTVS 228
S ++ T TV G T+ V ++TVS
Sbjct: 70 YTVSTNIPCETYTVSTSFPGEIYTVSTSFLVEIYTVS 106
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 183 SCGGNILNQRSILSAAH--CPY-GDATGRWRIRVG 278
SCGG + R L++ + PY D T W IRVG
Sbjct: 95 SCGGRVTGSRGTLTSPNFPSPYPTDVTCEWVIRVG 129
>SB_609| Best HMM Match : tRNA-synt_1 (HMM E-Value=2.2e-09)
Length = 250
Score = 27.5 bits (58), Expect = 6.7
Identities = 25/92 (27%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Frame = +3
Query: 147 LLYTWNWNQWWQSCGGNILNQRSILSAA------HCPYGDATGRWRIRVGSTFANSGGVV 308
L Y W W + + GG IL Q L A H D IRV N G +
Sbjct: 43 LEYAWEWKEKY---GGIILQQLKKLGCALDWNRTHFTMDDEYYAAVIRVFVDLYNKGQIY 99
Query: 309 HNVNRIIIHPNYNRRTADSDLCILRSNSNIAY 404
V I P +D ++ ++NS + Y
Sbjct: 100 RGVKMINWDPKAKTALSDEEVIHKQTNSKLYY 131
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +3
Query: 186 CGGNILNQRSILSAAHCPYGDATGRWRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADS 365
C G ++ + +L+AAHC + ++VG N ++V+R + + + S
Sbjct: 124 CTGVLVGPKHVLTAAHCVANEKP--HNLKVGFLQRNGMMNWYSVSRFAMSHKWRKNDIAS 181
Query: 366 DLCILRSNSN 395
D ++ NS+
Sbjct: 182 DYALIVLNSS 191
>SB_14573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.1 bits (57), Expect = 8.9
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = -3
Query: 506 PSERCSTPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVS-STSVIVGMN 330
P+++ T + +IT ++ + + T + + +T+ D VTV T+ + +
Sbjct: 53 PADQVVTFHEDETDKIITVPILDDNIVENTETLKVV---LTSNDPTVTVKPDTATVTIQD 109
Query: 329 DNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTTR 183
D++V + V + + NTP T +T + K +V DVS T+
Sbjct: 110 DDAVLSIEQRKDVAE--SVGNTPVIVKRTGYTGASHKFTIVVDDVSATK 156
>SB_3780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 438 HQQY**DERCCYKLCWNYCVRCRGHCQQYVC 346
H +Y ER C K+ + Y GHC + +C
Sbjct: 109 HARYILSERGCKKMLYKYLQGDFGHCPRVLC 139
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 371 EVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVW 237
E V S + D VHV+H G G N++T + W
Sbjct: 155 ETVVQSNEKFMFEGDFDVHVIHTRMPSGSGKRNSSTLYTADLDTW 199
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 27.1 bits (57), Expect = 8.9
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = -3
Query: 506 PSERCSTPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVS-STSVIVGMN 330
P+++ T + +IT ++ + + T + + +T+ D VTV T+ + +
Sbjct: 3244 PADQVVTFHEDETDKIITVPILDDNIVENTETLKVV---LTSNDPTVTVKPDTATVTIQD 3300
Query: 329 DNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTTR 183
D++V + V + + NTP T +T + K +V DVS T+
Sbjct: 3301 DDAVLSIEQRKDVAE--SVGNTPVIVKRTGYTGASHKFTIVVDDVSATK 3347
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,775,403
Number of Sequences: 59808
Number of extensions: 395111
Number of successful extensions: 1170
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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