Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f06r
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.8  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -2

Query: 695 NNLGKIYTLWSLDF-VHSDWCEFVG---MSISGRRSCSFVGGLML 573
           NNL +IY  WS  F +   +   +G   ++ +G+   S   GL+L
Sbjct: 315 NNLERIYFYWSFGFLIIQRFIHQIGTLEVAFTGKNFFSITRGLIL 359


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 695 NNLGKIYTLWSLDFV 651
           NNL +IY  WS  F+
Sbjct: 315 NNLERIYFYWSFGFL 329


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 695 NNLGKIYTLWSLDFV 651
           NNL +IY  WS  F+
Sbjct: 315 NNLERIYFYWSFGFL 329


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +3

Query: 582 PPDEGT*SATRYRHPHKLAPVGMHEVXRPKRIYLTEIIIILDSRTFERVL 731
           P DE      R+R    ++ +  HE      I LT       S  F+RVL
Sbjct: 94  PIDEKFVHPHRFRLKFNISSIPRHEKLTAAEIKLTRETAKNTSHPFQRVL 143


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1
          protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 41 EYLLSNENKPC 9
          EY+L NE+ PC
Sbjct: 34 EYVLLNEDNPC 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,613
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)