BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12f06r (735 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g06420.1 68415.m00711 expressed protein 32 0.45 At5g47020.1 68418.m05795 glycine-rich protein strong similarity ... 29 3.2 At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 28 5.6 At4g05120.1 68417.m00761 equilibrative nucleoside transporter, p... 27 9.8 >At2g06420.1 68415.m00711 expressed protein Length = 249 Score = 31.9 bits (69), Expect = 0.45 Identities = 32/119 (26%), Positives = 56/119 (47%) Frame = -3 Query: 700 MIIISVRYIRFGRXTSCIPTGASLWGCRYRVADHVPSSGGSCWITLLISEVRQIIGLIIS 521 M+++ +I+ + I G S+ RY +++H SG +C I +G+ I Sbjct: 64 MLLLRTAHIKRKKEPWFIVNGVSI---RYGISEHALISGFNCKNYGFIH-----LGIKIR 115 Query: 520 HSECDFLELKS*QFSNISVCYDLHPLAINGLVVLSESARSTLAMLNYVFYFLSKSLLNP 344 + L+ K F NI V ++ + G+V L E ++ L M+ V YFLS ++ P Sbjct: 116 EN----LDFKKKHFKNIVVKHEDVREKLIGMVPLGERSKERLRMM--VLYFLSNIIIAP 168 >At5g47020.1 68418.m05795 glycine-rich protein strong similarity to unknown protein (emb|CAB87688.1) Length = 1417 Score = 29.1 bits (62), Expect = 3.2 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 4/128 (3%) Frame = -3 Query: 652 CIPTGASLWGCRYRVADHVPSSGGSCWITLLISEVRQIIGLIISHSECDFLELKS*QFSN 473 C+ L C + + V + GG TLL+S V ++GL++S L L F Sbjct: 835 CVSEKYRLPNCYTPLEELVYTFGGPLPFTLLLSCVVVVLGLLLSTLSIKLLRL---SFYG 891 Query: 472 ISVCYDLHPLAINGLVVLSE--SARSTLAMLN-YVFYFLSKSLLNPPTRYMYSMTGEIV- 305 + + L+ LSE A+S + Y YF+ + P YS G I+ Sbjct: 892 ANSIEHQSAHCLPHLLSLSEVRGAKSEDTQTHAYRMYFMGPNNFREPWHLPYSPPGAIIE 951 Query: 304 FRYKFIFN 281 Y+ FN Sbjct: 952 IVYEDAFN 959 >At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1188 Score = 28.3 bits (60), Expect = 5.6 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +3 Query: 411 DSLKTTKPLIANGCRS*HTDMFENCYDFNSKKSHSE*EIIKPI 539 + LK K L NGC+ +D +N Y S+KSHS +++P+ Sbjct: 736 NQLKKLKRLSLNGCKGLLSDDIDNLY---SEKSHSV-SLLRPV 774 >At4g05120.1 68417.m00761 equilibrative nucleoside transporter, putative (ENT3) identical to putative equilibrative nucleoside transporter ENT3 [Arabidopsis thaliana] GI:16518993; contains similarity to SWISS-PROT:O54699 equilibrative nucleoside transporter 2 (Equilibrative nitrobenzylmercaptopurine riboside-insensitive nucleoside transporter, Equilibrative NBMPR-insensitive nucleoside transporter, Nucleoside transporter, ei-type) [Rattus norvegicus]; contains Pfam profile PF01733: Nucleoside transporter Length = 418 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = -3 Query: 235 NSVAVRMNRKYYLKLVICMCNVSSLVSRNAVLVFLKY 125 N ++ KY +V C+ + SLVS N++L Y Sbjct: 7 NQPPEKLQGKYQAMVVCCILGIGSLVSWNSMLTIADY 43 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,081,851 Number of Sequences: 28952 Number of extensions: 305141 Number of successful extensions: 643 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 642 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1614253080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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