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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f06r
         (735 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g06420.1 68415.m00711 expressed protein                             32   0.45 
At5g47020.1 68418.m05795 glycine-rich protein strong similarity ...    29   3.2  
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR...    28   5.6  
At4g05120.1 68417.m00761 equilibrative nucleoside transporter, p...    27   9.8  

>At2g06420.1 68415.m00711 expressed protein
          Length = 249

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 32/119 (26%), Positives = 56/119 (47%)
 Frame = -3

Query: 700 MIIISVRYIRFGRXTSCIPTGASLWGCRYRVADHVPSSGGSCWITLLISEVRQIIGLIIS 521
           M+++   +I+  +    I  G S+   RY +++H   SG +C     I      +G+ I 
Sbjct: 64  MLLLRTAHIKRKKEPWFIVNGVSI---RYGISEHALISGFNCKNYGFIH-----LGIKIR 115

Query: 520 HSECDFLELKS*QFSNISVCYDLHPLAINGLVVLSESARSTLAMLNYVFYFLSKSLLNP 344
            +    L+ K   F NI V ++     + G+V L E ++  L M+  V YFLS  ++ P
Sbjct: 116 EN----LDFKKKHFKNIVVKHEDVREKLIGMVPLGERSKERLRMM--VLYFLSNIIIAP 168


>At5g47020.1 68418.m05795 glycine-rich protein strong similarity to
            unknown protein (emb|CAB87688.1)
          Length = 1417

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 4/128 (3%)
 Frame = -3

Query: 652  CIPTGASLWGCRYRVADHVPSSGGSCWITLLISEVRQIIGLIISHSECDFLELKS*QFSN 473
            C+     L  C   + + V + GG    TLL+S V  ++GL++S      L L    F  
Sbjct: 835  CVSEKYRLPNCYTPLEELVYTFGGPLPFTLLLSCVVVVLGLLLSTLSIKLLRL---SFYG 891

Query: 472  ISVCYDLHPLAINGLVVLSE--SARSTLAMLN-YVFYFLSKSLLNPPTRYMYSMTGEIV- 305
             +         +  L+ LSE   A+S     + Y  YF+  +    P    YS  G I+ 
Sbjct: 892  ANSIEHQSAHCLPHLLSLSEVRGAKSEDTQTHAYRMYFMGPNNFREPWHLPYSPPGAIIE 951

Query: 304  FRYKFIFN 281
              Y+  FN
Sbjct: 952  IVYEDAFN 959


>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1188

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 411 DSLKTTKPLIANGCRS*HTDMFENCYDFNSKKSHSE*EIIKPI 539
           + LK  K L  NGC+   +D  +N Y   S+KSHS   +++P+
Sbjct: 736 NQLKKLKRLSLNGCKGLLSDDIDNLY---SEKSHSV-SLLRPV 774


>At4g05120.1 68417.m00761 equilibrative nucleoside transporter,
           putative (ENT3) identical to putative equilibrative
           nucleoside transporter ENT3 [Arabidopsis thaliana]
           GI:16518993; contains similarity to SWISS-PROT:O54699
           equilibrative nucleoside transporter 2 (Equilibrative
           nitrobenzylmercaptopurine riboside-insensitive
           nucleoside transporter, Equilibrative NBMPR-insensitive
           nucleoside transporter, Nucleoside transporter, ei-type)
           [Rattus norvegicus]; contains Pfam profile PF01733:
           Nucleoside transporter
          Length = 418

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 235 NSVAVRMNRKYYLKLVICMCNVSSLVSRNAVLVFLKY 125
           N    ++  KY   +V C+  + SLVS N++L    Y
Sbjct: 7   NQPPEKLQGKYQAMVVCCILGIGSLVSWNSMLTIADY 43


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,081,851
Number of Sequences: 28952
Number of extensions: 305141
Number of successful extensions: 643
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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