Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f06f
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   1.7  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   3.0  
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    23   6.9  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   9.2  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.2  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/53 (22%), Positives = 23/53 (43%)
 Frame = -3

Query: 403 RYSAAKSAWLHTFLGSPLFSSVVSPCADSFSINHFSDKLYTCFCLSGSLFTSF 245
           R + A + W     G P   ++++   +   I+H +     CF   G L+ S+
Sbjct: 322 RNAEALAKWASGQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTRGDLWISW 374


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 440 EQQLWSCINVKFPILRCKISLAPYFSWFTFV-FISC 336
           E++L   I++   +L C   L   F W  FV FI C
Sbjct: 258 EKELNEIISMHQRVLNCVFLLETTFRWVFFVQFIQC 293


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 70  IILVYIRHTGFNLLV*ISQFRTM 2
           + +V I HT F++LV + +FR M
Sbjct: 104 VAVVRISHTVFHVLVPVHKFRGM 126


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 280 CFCLSGSLFTSFMNFCRPSKLCEAQS 203
           C   +G++ T+ +  C P K C+ ++
Sbjct: 30  CVSHAGAILTAPLIHCHPLKACDGEA 55


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 356 TFVFISCFALCRFLFNKPFF 297
           TFVFI+   +   L  KPF+
Sbjct: 644 TFVFIALLCIPWMLLGKPFY 663


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,206
Number of Sequences: 2352
Number of extensions: 13677
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)