Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12f03r
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 243 1e-64
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 239 1e-63
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 239 1e-63
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 237 4e-63
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 138 3e-33
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 137 6e-33
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 136 2e-32
At5g10500.1 68418.m01216 kinase interacting family protein simil... 31 0.78
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 29 3.1
At3g12685.1 68416.m01583 expressed protein contains Pfam domain,... 29 4.1
At1g74430.1 68414.m08623 myb family transcription factor (MYB95)... 28 5.5
At1g24350.1 68414.m03071 expressed protein contains Pfam domain,... 28 5.5
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 7.2
At3g49450.1 68416.m05405 F-box family protein contains F-box dom... 27 9.6
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 27 9.6
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 243 bits (594), Expect = 1e-64
Identities = 116/170 (68%), Positives = 138/170 (81%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KV+H+ F I+EGLM VDGPS K WR GRGA QNIIP+STGAAKAVGKV+
Sbjct: 246 KVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVL 305
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQV 366
P LNGKLTGMAFRVP +NVSVVDLT RL K ASYE +K +K A+EGPLKGILGYT++ V
Sbjct: 306 PELNGKLTGMAFRVPTSNVSVVDLTCRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDV 365
Query: 365 VSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
VS+DF+GDS SSIFDA AGI L+ +FVKL+SWYDNE+GYS+RV+DLI+++
Sbjct: 366 VSNDFVGDSRSSIFDANAGIGLSKSFVKLVSWYDNEWGYSNRVLDLIEHM 415
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 239 bits (586), Expect = 1e-63
Identities = 117/170 (68%), Positives = 137/170 (80%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KVI+D F IVEGLM VDGPS K WR GR A NIIP+STGAAKAVGKV+
Sbjct: 166 KVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 225
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQV 366
PALNGKLTGM+FRVP +VSVVDLTVRL K A+Y+ IK+ +KE +EG LKGILGYTED V
Sbjct: 226 PALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDV 285
Query: 365 VSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
VS+DF+GD+ SSIFDA AGI+L+D FVKL+SWYDNE+GYSSRV+DLI ++
Sbjct: 286 VSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 239 bits (586), Expect = 1e-63
Identities = 115/170 (67%), Positives = 137/170 (80%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KV+H+ F I+EGLM VDGPS K WR GRGA QNIIP+STGAAKAVGKV+
Sbjct: 244 KVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVL 303
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQV 366
P LNGKLTGMAFRVP NVSVVDLT RL K ASYE +K +K A+EGPL+GILGYTE+ V
Sbjct: 304 PELNGKLTGMAFRVPTPNVSVVDLTCRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDV 363
Query: 365 VSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
VS+DF+GDS SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI+++
Sbjct: 364 VSNDFLGDSRSSIFDANAGIGLSKSFMKLVSWYDNEWGYSNRVLDLIEHM 413
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 237 bits (581), Expect = 4e-63
Identities = 115/170 (67%), Positives = 137/170 (80%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KVI+D F IVEGLM VDGPS K WR GR A NIIP+STGAAKAVGKV+
Sbjct: 166 KVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVL 225
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQV 366
P+LNGKLTGM+FRVP +VSVVDLTVRL K A+Y+ IK+ +KE +EG +KGILGYTED V
Sbjct: 226 PSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDV 285
Query: 365 VSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
VS+DF+GD+ SSIFDA AGI+L+D FVKL+SWYDNE+GYSSRV+DLI ++
Sbjct: 286 VSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 138 bits (334), Expect = 3e-33
Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KV+ + F IV+G M +D L R R A NI+P STGAAKAV V+
Sbjct: 245 KVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVSLVL 303
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPA-SYEAIKQKVKEAAEGPLKGILGYTEDQ 369
P L GKL G+A RVP NVSVVDL + + K + E + + ++AA GP+KGIL +
Sbjct: 304 PQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAP 363
Query: 368 VVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
+VS DF S+ D++ + + D+ VK+++WYDNE+GYS RV+DL + SK
Sbjct: 364 LVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASK 417
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 137 bits (332), Expect = 6e-33
Identities = 74/166 (44%), Positives = 98/166 (59%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KV+ F I++G M +D L R R A NI+P STGAAKAV V+
Sbjct: 226 KVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVL 284
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQV 366
P L GKL G+A RVP NVSVVDL V++ K E + ++AAE LKGIL ++ +
Sbjct: 285 PNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPL 344
Query: 365 VSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 228
VS DF SS D++ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 345 VSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 390
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 136 bits (328), Expect = 2e-32
Identities = 72/166 (43%), Positives = 98/166 (59%)
Frame = -2
Query: 725 KVIHDNFEIVEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVI 546
KV+ F I++G M +D L R R A NI+P STGAAKAV V+
Sbjct: 223 KVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVALVL 281
Query: 545 PALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQV 366
P L GKL G+A RVP NVSVVDL V++ K E + +++AE LKGIL ++ +
Sbjct: 282 PNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPL 341
Query: 365 VSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 228
VS DF S+ D++ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 342 VSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 387
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 256 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 387
Y +LISF + SFK A A + + +++ +TT +SV+P
Sbjct: 59 YKRRPELISFVEESFKAYRALAERYDHISKELQNANTTIASVFP 102
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 256 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 387
Y +LISF + S++ A A + + + +++ +TT +SV+P
Sbjct: 3 YKKRPELISFVEESYRAYRALAERYDHISTELQNANTTIASVFP 46
>At3g12685.1 68416.m01583 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 213
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = -2
Query: 575 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 396
G + VGK LN KLT A R V ++ G ++ +++ E PLK
Sbjct: 135 GVRREVGKHAKVLN-KLTANARRSEVMSLK--------GNESNKALTSEEISEEIAPPLK 185
Query: 395 GILGYTEDQVVSSDFIG 345
+G+TE +V++ G
Sbjct: 186 ESIGHTEVEVIAGALFG 202
>At1g74430.1 68414.m08623 myb family transcription factor (MYB95)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 271
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 513 CHSSQLAIKSRDNLTHSFGSTSRGRNDVLLSTTAITP*FSRRSINSFLCSSCG 671
C +LA K D +TH +T+ DV S+T +P S S + CSS G
Sbjct: 111 CLKKRLAKKGIDPMTHEPTTTTSLTVDVTSSSTTSSPTPSPTSSSFSSCSSTG 163
>At1g24350.1 68414.m03071 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 168
Score = 28.3 bits (60), Expect = 5.5
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Frame = -2
Query: 590 IPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVV--DLT-VRLGKPASYEAIKQKVK 420
+P+S A V L G F + + SVV D T VRL E + Q V
Sbjct: 61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVY 120
Query: 419 E-------AAEGPLKGILGYTEDQVVSSDFIGDS 339
E A PL+ +LG+T QVV+ +G +
Sbjct: 121 ELPAEHPLAESRPLRELLGHTPPQVVAGGMLGSA 154
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 434 KQKVKEAAEGPLKGILGYTE-DQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLIS 273
+++ KE E P+KG E + +V + IGD S+ + S N+N+ L S
Sbjct: 814 EEEEKEVLENPVKGEEEAREMETLVVEEDIGDETPSLTEIVENSSENENYTSLRS 868
>At3g49450.1 68416.m05405 F-box family protein contains F-box domain
Pfam:PF00646
Length = 397
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -2
Query: 611 RGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIK 432
R A+ I STG K++ KV +T + + V+ +T+R KP ++A +
Sbjct: 146 RDARMMICNPSTGQFKSLPKVRSCRGNVITYIGYNPIEKQYKVLCMTIR-EKPFKFKAEE 204
Query: 431 QKVKEAAEGPLK 396
+V G LK
Sbjct: 205 HQVLTLGTGKLK 216
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 403 GPSAASLTFCLMAS*LAGFPRRT-VRSTTDTLATGTRNAIPVSLPLRAG 546
GP + + C MA+ AGFP +R+ ++G + V+ ++AG
Sbjct: 99 GPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAG 147
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,509,693
Number of Sequences: 28952
Number of extensions: 256009
Number of successful extensions: 757
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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