Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f02r
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   8.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.3  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 163 PSTCSGSSAADLQHPSLLCGI 101
           P  C G   A L+  + +CGI
Sbjct: 448 PRNCIGKKFAMLELKAAICGI 468


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 163 PSTCSGSSAADLQHPSLLCGI 101
           P  C G   A L+  + +CGI
Sbjct: 448 PRNCIGKKFAMLELKAAICGI 468


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 210 NTAVGSTPNTGLYDILPNGPVGNPCNC 290
           N AV +  N  LY+ + NG   NP  C
Sbjct: 192 NGAV-NVDNIDLYEEIFNGNRANPNGC 217


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 105  PHNKEGCCKSAAEEP 149
            P N EGC +  A  P
Sbjct: 963  PENVEGCMQHTAAPP 977


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 154 CSGSSAADLQHPSLLCGI 101
           C G   A L+  ++LCGI
Sbjct: 435 CIGQKFAMLEIKTVLCGI 452


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 154 CSGSSAADLQHPSLLCGI 101
           C G   A L+  ++LCGI
Sbjct: 435 CIGQKFAMLEIKTVLCGI 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,692
Number of Sequences: 336
Number of extensions: 1549
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)