Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f02r
         (349 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   5.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   5.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   7.5  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    21   9.9  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    21   9.9  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 288 SCKDFQQDRWEECRKDQC*EWIQR 217
           +CKD    R      +QC EW +R
Sbjct: 96  NCKDASTVRCSFATSEQCSEWHRR 119


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 288 SCKDFQQDRWEECRKDQC*EWIQR 217
           +CKD    R      +QC EW +R
Sbjct: 96  NCKDASTVRCSFATSEQCSEWHRR 119


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 320 NKLRKIKMIGAVARISNRTVGKNVVKTSV 234
           NK+   K+  +VAR +   VGK  V T++
Sbjct: 577 NKISGRKIDPSVARFAEELVGKENVTTAL 605


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 141 EEPEHVEGQASLIIDVEWQILPGNT 215
           E P+  E    ++ DVE  I+PG T
Sbjct: 55  EAPQQPEKWEEVMADVERVIMPGVT 79


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 141 EEPEHVEGQASLIIDVEWQILPGNT 215
           E P+  E    ++ DVE  I+PG T
Sbjct: 86  EAPQQPEKWEEVMADVERVIMPGVT 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,012
Number of Sequences: 2352
Number of extensions: 7533
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)