Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12f02f
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   7.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   7.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   9.6  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 62  SCKDFQQDRWEECRKDQC*EWIQR 133
           +CKD    R      +QC EW +R
Sbjct: 96  NCKDASTVRCSFATSEQCSEWHRR 119


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 62  SCKDFQQDRWEECRKDQC*EWIQR 133
           +CKD    R      +QC EW +R
Sbjct: 96  NCKDASTVRCSFATSEQCSEWHRR 119


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 30  NKLRKIKMIGAVARISNRTVGKNVVKTSV 116
           NK+   K+  +VAR +   VGK  V T++
Sbjct: 577 NKISGRKIDPSVARFAEELVGKENVTTAL 605


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,431
Number of Sequences: 2352
Number of extensions: 8348
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)