Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e24r
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB020523-1|BAA76752.1|  368|Homo sapiens endonuclease G-like pro...    41   0.005
BC016351-1|AAH16351.1|  297|Homo sapiens endonuclease G protein.       37   0.077
BC004922-1|AAH04922.1|  297|Homo sapiens endonuclease G protein.       37   0.077
AL441992-12|CAI15412.1|  297|Homo sapiens endonuclease G protein.      37   0.077
BC104213-1|AAI04214.1|  228|Homo sapiens ENDOGL1 protein protein.      36   0.10 
BC104212-1|AAI04213.1|  228|Homo sapiens ENDOGL1 protein protein.      36   0.10 
X79444-1|CAA55963.1|  297|Homo sapiens endonuclease protein.           34   0.41 
AB020735-1|BAA76753.1|  149|Homo sapiens endonuclease G-like pro...    33   0.72 
AK055470-1|BAB70928.1|  127|Homo sapiens protein ( Homo sapiens ...    32   2.2  

>AB020523-1|BAA76752.1|  368|Homo sapiens endonuclease G-like
           protein-1 protein.
          Length = 368

 Score = 40.7 bits (91), Expect = 0.005
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
 Frame = -3

Query: 569 ARGHLAAKTDFIYATGQRA-SFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVY 393
           +RGH+A   +  +++   A +FY  N  PQ    N+G WNR+E    R + +      V 
Sbjct: 137 SRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYC-RELTERFEDVWVV 195

Query: 392 TGTFRVTQLRNQNNRLVDIFLHRASNGALQIPVPLYFYKVV 270
           +G   + Q R    ++V   +    N    + VP + YKV+
Sbjct: 196 SGPLTLPQTRGDGKKIVSYQVIGEDN----VAVPSHLYKVI 232


>BC016351-1|AAH16351.1|  297|Homo sapiens endonuclease G protein.
          Length = 297

 Score = 36.7 bits (81), Expect = 0.077
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
 Frame = -3

Query: 566 RGHLAAKTDFIYAT-GQRASFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYT 390
           RGHLAA  +  ++      +FY  N APQ    N   WN LE+   R + ++  +  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEK-YSRSLTRSYQNVYVCT 197

Query: 389 GTFRVTQLRNQNNRLVDIFLHRASNGALQIPVPLYFYKVV 270
           G   + +        V   +     G   + VP +F+KV+
Sbjct: 198 GPLFLPRTEADGKSYVKYQV----IGKNHVAVPTHFFKVL 233


>BC004922-1|AAH04922.1|  297|Homo sapiens endonuclease G protein.
          Length = 297

 Score = 36.7 bits (81), Expect = 0.077
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
 Frame = -3

Query: 566 RGHLAAKTDFIYAT-GQRASFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYT 390
           RGHLAA  +  ++      +FY  N APQ    N   WN LE+   R + ++  +  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEK-YSRSLTRSYQNVYVCT 197

Query: 389 GTFRVTQLRNQNNRLVDIFLHRASNGALQIPVPLYFYKVV 270
           G   + +        V   +     G   + VP +F+KV+
Sbjct: 198 GPLFLPRTEADGKSYVKYQV----IGKNHVAVPTHFFKVL 233


>AL441992-12|CAI15412.1|  297|Homo sapiens endonuclease G protein.
          Length = 297

 Score = 36.7 bits (81), Expect = 0.077
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
 Frame = -3

Query: 566 RGHLAAKTDFIYAT-GQRASFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYT 390
           RGHLAA  +  ++      +FY  N APQ    N   WN LE+   R + ++  +  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEK-YSRSLTRSYQNVYVCT 197

Query: 389 GTFRVTQLRNQNNRLVDIFLHRASNGALQIPVPLYFYKVV 270
           G   + +        V   +     G   + VP +F+KV+
Sbjct: 198 GPLFLPRTEADGKSYVKYQV----IGKNHVAVPTHFFKVL 233


>BC104213-1|AAI04214.1|  228|Homo sapiens ENDOGL1 protein protein.
          Length = 228

 Score = 36.3 bits (80), Expect = 0.10
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = -3

Query: 512 SFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYTGTFRVTQLRNQNNRLVDIF 333
           +FY  N  PQ    N+G WNR+E    R + +      V +G   + Q R    ++V   
Sbjct: 17  TFYLSNIVPQDFDNNSGYWNRIEMYC-RELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQ 75

Query: 332 LHRASNGALQIPVPLYFYKVV 270
           +    N    + VP + YKV+
Sbjct: 76  VIGEDN----VAVPSHLYKVI 92


>BC104212-1|AAI04213.1|  228|Homo sapiens ENDOGL1 protein protein.
          Length = 228

 Score = 36.3 bits (80), Expect = 0.10
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = -3

Query: 512 SFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYTGTFRVTQLRNQNNRLVDIF 333
           +FY  N  PQ    N+G WNR+E    R + +      V +G   + Q R    ++V   
Sbjct: 17  TFYLSNIVPQDFDNNSGYWNRIEMYC-RELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQ 75

Query: 332 LHRASNGALQIPVPLYFYKVV 270
           +    N    + VP + YKV+
Sbjct: 76  VIGEDN----VAVPSHLYKVI 92


>X79444-1|CAA55963.1|  297|Homo sapiens endonuclease protein.
          Length = 297

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
 Frame = -3

Query: 566 RGHLAAKTDFIYAT-GQRASFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYT 390
           RGHLAA  +  ++      +FY    APQ    N   WN LE+   R + ++  +  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSKVAPQVPHLNQNAWNNLEK-YSRSLTRSYQNVYVCT 197

Query: 389 GTFRVTQLRNQNNRLVDIFLHRASNGALQIPVPLYFYKVV 270
           G   + +        V   +     G   + VP +F+KV+
Sbjct: 198 GPLFLPRTEADGKSYVKYQV----IGKNHVAVPTHFFKVL 233


>AB020735-1|BAA76753.1|  149|Homo sapiens endonuclease G-like
           protein-2 protein.
          Length = 149

 Score = 33.5 bits (73), Expect = 0.72
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = -3

Query: 512 SFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYTGTFRVTQLRNQNNRLVDIF 333
           +FY  N  PQ    N+G WNR+E    R + +      V +G   + Q R    ++V   
Sbjct: 17  TFYLSNIVPQDFDNNSGYWNRIEMYC-RELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQ 75

Query: 332 LHRASNGALQIPVPLYFYK 276
           +    N    + VP + YK
Sbjct: 76  VIGEDN----VAVPSHLYK 90


>AK055470-1|BAB70928.1|  127|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30908 fis, clone FEBRA2006150. ).
          Length = 127

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 149 NWVGWQPDRIDLGYSFCC 96
           NW+ W+P+  D+G  FCC
Sbjct: 107 NWLQWKPEAEDIGTKFCC 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,987,522
Number of Sequences: 237096
Number of extensions: 2272893
Number of successful extensions: 5416
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5416
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)