Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e24f
         (559 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX641059-1|CAE46030.1|  351|Homo sapiens hypothetical protein pr...    30   4.8  
BC051715-1|AAH51715.1|  828|Homo sapiens neuroligin 3 protein.         30   4.8  
BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.         30   4.8  
AF217413-2|AAF71232.1|  828|Homo sapiens neuroligin 3 isoform pr...    30   4.8  
AF217411-1|AAF71230.1|  828|Homo sapiens neuroligin 3 isoform HN...    30   4.8  
AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.     30   4.8  
AF217413-1|AAF71233.1|  848|Homo sapiens neuroligin 3 isoform pr...    29   8.4  
AF217412-1|AAF71231.1|  558|Homo sapiens neuroligin 3 isoform HN...    29   8.4  
AB040913-1|BAA96004.1|  682|Homo sapiens KIAA1480 protein protein.     29   8.4  

>BX641059-1|CAE46030.1|  351|Homo sapiens hypothetical protein
           protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 15  TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 67

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
           YIH G+Y+  TGN   G I  + G  ++I        +   +     A G      + + 
Sbjct: 68  YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 126

Query: 444 TANWLRGNSAF 476
              W+  N AF
Sbjct: 127 ALRWVSENIAF 137


>BC051715-1|AAH51715.1|  828|Homo sapiens neuroligin 3 protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
           YIH G+Y+  TGN   G I  + G  ++I        +   +     A G      + + 
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243

Query: 444 TANWLRGNSAF 476
              W+  N AF
Sbjct: 244 ALRWVSENIAF 254


>BC032555-1|AAH32555.1|  823|Homo sapiens neuroligin 1 protein.
          Length = 823

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +3

Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           D G P+PV  YIH G+Y+  TGN   G +  + G  ++I
Sbjct: 168 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 206


>AF217413-2|AAF71232.1|  828|Homo sapiens neuroligin 3 isoform
           protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
           YIH G+Y+  TGN   G I  + G  ++I        +   +     A G      + + 
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243

Query: 444 TANWLRGNSAF 476
              W+  N AF
Sbjct: 244 ALRWVSENIAF 254


>AF217411-1|AAF71230.1|  828|Homo sapiens neuroligin 3 isoform HNL3
           protein.
          Length = 828

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
 Frame = +3

Query: 90  TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
           T + EP +    LN   +    D   A +Q E LA+   ND       R +G   +P  V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184

Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
           YIH G+Y+  TGN   G I  + G  ++I        +   +     A G      + + 
Sbjct: 185 YIHGGSYMEGTGNMIDGSIPASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243

Query: 444 TANWLRGNSAF 476
              W+  N AF
Sbjct: 244 ALRWVSENIAF 254


>AB028993-1|BAA83022.2|  826|Homo sapiens KIAA1070 protein protein.
          Length = 826

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +3

Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
           D G P+PV  YIH G+Y+  TGN   G +  + G  ++I
Sbjct: 171 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 209


>AF217413-1|AAF71233.1|  848|Homo sapiens neuroligin 3 isoform
           protein.
          Length = 848

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
 Frame = +3

Query: 168 ALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGN--TGQIRLNRGEQ 341
           A +Q E LA+   ND       R +G   +P  VYIH G+Y+  TGN   G I  + G  
Sbjct: 176 AKKQGEDLAD---NDGDEDEDIRDSG--AKPVMVYIHGGSYMEGTGNMIDGSILASYGNV 230

Query: 342 VLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAF 476
           ++I        +   +     A G      + +    W+  N AF
Sbjct: 231 IVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQALRWVSENIAF 274


>AF217412-1|AAF71231.1|  558|Homo sapiens neuroligin 3 isoform HNL3s
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
 Frame = +3

Query: 168 ALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGN--TGQIRLNRGEQ 341
           A +Q E LA+   ND       R +G   +P  VYIH G+Y+  TGN   G I  + G  
Sbjct: 176 AKKQGEDLAD---NDGDEDEDIRDSG--AKPVMVYIHGGSYMEGTGNMIDGSILASYGNV 230

Query: 342 VLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAF 476
           ++I        +   +     A G      + +    W+  N AF
Sbjct: 231 IVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQALRWVSENIAF 274


>AB040913-1|BAA96004.1|  682|Homo sapiens KIAA1480 protein protein.
          Length = 682

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
 Frame = +3

Query: 168 ALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGN--TGQIRLNRGEQ 341
           A +Q E LA+   ND       R +G   +P  VYIH G+Y+  TGN   G I  + G  
Sbjct: 10  AKKQGEDLAD---NDGDEDEDIRDSG--AKPVMVYIHGGSYMEGTGNMIDGSILASYGNV 64

Query: 342 VLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAF 476
           ++I        +   +     A G      + +    W+  N AF
Sbjct: 65  IVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQALRWVSENIAF 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,165,618
Number of Sequences: 237096
Number of extensions: 1726540
Number of successful extensions: 8209
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8209
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)