Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e24f
         (559 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-P...    39   0.004
BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p pro...    37   0.021
AE014296-1869|AAN11890.1|  253|Drosophila melanogaster CG32080-P...    33   0.26 
BT003434-1|AAO39437.1|  982|Drosophila melanogaster SD07269p pro...    28   7.4  
AE014134-3343|AAF53964.2|  981|Drosophila melanogaster CG9252-PA...    28   7.4  
AE014296-3084|AAF49208.1|  430|Drosophila melanogaster CG6839-PA...    28   9.8  

>AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-PA
           protein.
          Length = 1371

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 216 RSGCTFRVNGDLGQPQPVYIHRGNY-LSPTGNTGQIRLNRGEQVLIACTGSG 368
           R  C F+VNGDL  P P++    +Y +     T  +RL  GE + + C G G
Sbjct: 44  RGDCEFKVNGDLNDPAPLFSRHNSYEIIVPDPTDTVRLVNGELLDMFCPGVG 95



 Score = 36.7 bits (81), Expect = 0.021
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +3

Query: 225  CTFRVNGDLGQPQPVYIHR-----GNYLSPTGNTGQIRLNRGEQVLIACTGS 365
            C+F+VNGDL  P P+++ R       YL P    G ++L  GE +   C  S
Sbjct: 987  CSFKVNGDLKDPAPLFVVRSELGHARYLEP-NQEGVVQLKHGEALEFHCINS 1037



 Score = 33.9 bits (74), Expect = 0.15
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 201 TRNDFRSGCTFRVNGDLGQPQPVYIHRG--NYLSPTGNTGQIRLNRGEQVLIACTGS 365
           T N   + C F  NGDL  P P+   +G  ++L P   +G   +  G  + + CTG+
Sbjct: 595 TANPIANPCRFSTNGDLKDPAPLLTPQGALSWLLP-DESGLYTVEEGSSIDLHCTGA 650


>BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p
           protein.
          Length = 1108

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +3

Query: 225 CTFRVNGDLGQPQPVYIHR-----GNYLSPTGNTGQIRLNRGEQVLIACTGS 365
           C+F+VNGDL  P P+++ R       YL P    G ++L  GE +   C  S
Sbjct: 724 CSFKVNGDLKDPAPLFVVRSELGHARYLEP-NQEGVVQLKHGEALEFHCINS 774



 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 201 TRNDFRSGCTFRVNGDLGQPQPVYIHRG--NYLSPTGNTGQIRLNRGEQVLIACTGS 365
           T N   + C F  NGDL  P P+   +G  ++L P   +G   +  G  + + CTG+
Sbjct: 332 TANPIANPCRFSTNGDLKDPAPLLTPQGALSWLLP-DESGLYTVEDGSSIDLHCTGA 387


>AE014296-1869|AAN11890.1|  253|Drosophila melanogaster CG32080-PA
           protein.
          Length = 253

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
 Frame = +3

Query: 96  LPEPGQLAFVLNE-DEFE--DYLDAYLALQQSEMLANQTRNDFRS-GCT-FRVNGDLGQP 260
           LPE  +  F  ++ D +E  D  +   ALQ  +   N   +   + GC     + ++  P
Sbjct: 90  LPESEKKEFSDSDSDSYETRDATNEVNALQLQQQTQNVASSQIEACGCACISESRNMQTP 149

Query: 261 QP--VYIHRGNYLSPTGNTGQIRLNRGEQVLIACTGSGRTIRH 383
           Q   V+IH    +     TG+IR  RG+  LIAC+GS    +H
Sbjct: 150 QTSQVFIHEIAQIGKEKKTGRIRGVRGQLKLIACSGSVHFQQH 192


>BT003434-1|AAO39437.1|  982|Drosophila melanogaster SD07269p
           protein.
          Length = 982

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 425 TADRPDSKVRSNIGVTDRTAGSCASDKNLFPTIKTN 318
           T  RPD+   ++    +R   +CA +KN+F T +TN
Sbjct: 172 TKKRPDTCAPTDDSRKNREPRACAPNKNIFKTRETN 207


>AE014134-3343|AAF53964.2|  981|Drosophila melanogaster CG9252-PA
           protein.
          Length = 981

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 425 TADRPDSKVRSNIGVTDRTAGSCASDKNLFPTIKTN 318
           T  RPD+   ++    +R   +CA +KN+F T +TN
Sbjct: 171 TKKRPDTCAPTDDSRKNREPRACAPNKNIFKTRETN 206


>AE014296-3084|AAF49208.1|  430|Drosophila melanogaster CG6839-PA
           protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
 Frame = +3

Query: 216 RSG-CTFRVNGDLGQPQPVYIHRGNY-LSPTGNTGQIRLNRGEQVLIACTGSGRTIRHPN 389
           R+G C+  + G L  P+PVY+   +    P  + G +    G  + + C     T  H  
Sbjct: 53  RAGACSVTIRGGLPSPEPVYLKTDSEDFYPFSDVGVMEFESGGSLQLWCPSGFNT--H-- 108

Query: 390 VASNLAVGTVSCQNNNLVTANWLRGNSAFGQLTCSSHAHHDAQQTNTRCFNNHFVI 557
            + NL   T SC +    +      N  F  L C S     A ++   C N   VI
Sbjct: 109 -SENLL--TASCVSGTTFSVG--GSNFEFKDLYCKSWPGFKAVKSGATC-NGGIVI 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,267,972
Number of Sequences: 53049
Number of extensions: 539859
Number of successful extensions: 1582
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)