Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12e19r
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl... 32 0.47
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl... 32 0.47
At4g21640.1 68417.m03136 subtilase family protein similar to sub... 31 0.82
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 30 1.4
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 30 1.4
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 30 1.4
At4g16080.1 68417.m02438 hypothetical protein contains Pfam prof... 29 4.4
At5g25170.1 68418.m02984 expressed protein 28 5.8
At2g01050.1 68415.m00010 hypothetical protein 28 5.8
At1g62260.1 68414.m07024 pentatricopeptide (PPR) repeat-containi... 28 5.8
At4g11530.1 68417.m01850 protein kinase family protein contains ... 28 7.7
At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like... 28 7.7
>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 336 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 440
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 336 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 440
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At4g21640.1 68417.m03136 subtilase family protein similar to
subtilase SP1 [Oryza sativa] GI:9957714
Length = 733
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 649 RNTSIWTRLGCSPIDRSTEIASSAAADGSEHS 744
+ T IW LG SPI S +SSA A G H+
Sbjct: 120 KTTRIWDHLGLSPIPTSFSSSSSAKAKGLLHN 151
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 581 LKGSGSW*EQYQRTVGTIDSRWV 649
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 581 LKGSGSW*EQYQRTVGTIDSRWV 649
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 581 LKGSGSW*EQYQRTVGTIDSRWV 649
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At4g16080.1 68417.m02438 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 379
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 217 PLYCSLQFSLLVTMSSSLWRLPSDTL 294
P Y L FS+LVT +SLW L D +
Sbjct: 212 PQYHELNFSILVTGHTSLWSLLQDNV 237
>At5g25170.1 68418.m02984 expressed protein
Length = 218
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 192 QILRRFGPGWWPRLRQY*LGCPCLLP 115
Q+ RR P W RL ++ L C C+LP
Sbjct: 127 QLTRRSIPSWVNRLARFGLFCNCVLP 152
>At2g01050.1 68415.m00010 hypothetical protein
Length = 515
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 210 IMTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTL-----GYYDTLLDNS 374
+MT++ P FF+ FEL E Y AAL G P + L +D L D+
Sbjct: 108 VMTVMDLPRQFFM--IRFELEE---EYMAALTGG-PWRVLGNYLLVQDWSSRFDPLRDDI 161
Query: 375 TLLDVWAEVDGMCYSYDAHILVVILLREFG 464
VW + + Y+Y L++ + R G
Sbjct: 162 VTTPVWVRLSNIPYNYYHRCLLMEIARGLG 191
>At1g62260.1 68414.m07024 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 656
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 146 NTDLGAPAFFQNALVGIVSFGKSNANDIYPVVLTSIS 36
N +G AF NA + FG +N IYP +T +S
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
>At4g11530.1 68417.m01850 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 931
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -3
Query: 644 ILNQWFQQCAGIVLTNYHYLSTATCFHGEF-----YDPAYRRIIA 525
+LN F L + Y+ST TCF+G F YD RRI++
Sbjct: 2 MLNTLFLPIFLFFLITFDYVSTQTCFNGYFKPNGTYDLNRRRILS 46
>At1g49740.1 68414.m05578 expressed protein similar to MAP3K-like
protein kinase GB:CAB16796 GI:4006878 from [Arabidopsis
thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +3
Query: 252 HNEF-ELVEVAVRYTAAL----NGSSPSEQINKNTLGYYDTLLDNSTLLDVWA--EVDGM 410
HN F L EV+ +A L S + Q+N G+ + D D+W DG
Sbjct: 84 HNSFARLGEVSRTGSAILAPTNQQDSITSQLNNGVRGFMLDMYDFQN--DIWLCHSFDGT 141
Query: 411 CYSYDAHILVVILLREF 461
C+++ A + +LREF
Sbjct: 142 CFNFTAFQPAINILREF 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,822,169
Number of Sequences: 28952
Number of extensions: 413221
Number of successful extensions: 1078
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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