Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e18r
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.8  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 116 LSLKSLFVKVFNYVFVLLI 172
           ++L+  F+ VFN VFV+L+
Sbjct: 219 ITLQHTFIWVFNDVFVMLL 237


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 116 LSLKSLFVKVFNYVFVLLI 172
           ++L+  F+ VFN VFV+L+
Sbjct: 219 ITLQHTFIWVFNDVFVMLL 237


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 116 LSLKSLFVKVFNYVFVLLI 172
           ++L+  F+ VFN VFV+L+
Sbjct: 219 ITLQHTFIWVFNDVFVMLL 237


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 127 ITLCKSLQLCLCTSHRRRSS*FLMLAPIPR 216
           I LC  L   L +S R++   +  LAPIP+
Sbjct: 6   IILCLVLLALLVSSLRKKGRFWECLAPIPQ 35


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 127 ITLCKSLQLCLCTSHRRRSS*FLMLAPIPR 216
           I LC  L   L +S R++   +  LAPIP+
Sbjct: 6   IILCLVLLALLVSSLRKKGRFWECLAPIPQ 35


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 482 SSVSNEHSVAYMQEFSLNSLLDQHW 556
           S +  EH VAY +E    +L   HW
Sbjct: 186 SDLDEEHRVAYWREDIGLNLHHWHW 210


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -3

Query: 226 SVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE*F*TKSRTR 104
           SVY  +  P  K K  +  ++  D   D   E   TKS  R
Sbjct: 7   SVYNNDFYPIEKTKAQLANKELWDQFHDLQTEMIITKSGRR 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,463
Number of Sequences: 336
Number of extensions: 2655
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)