Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12e18r
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical ... 57 1e-08
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 41 0.001
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 41 0.001
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical ... 38 0.007
Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical pr... 37 0.012
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 37 0.016
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 36 0.028
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 34 0.11
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 34 0.11
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 34 0.11
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical p... 29 2.4
Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 29 4.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 4.3
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024805-5|AAK39339.1| 494|Caenorhabditis elegans Hypothetical ... 28 5.7
AC024805-4|ABA00170.1| 318|Caenorhabditis elegans Hypothetical ... 28 5.7
AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC024751-8|AAK21510.3| 369|Caenorhabditis elegans Hypothetical ... 27 9.9
>AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical
protein Y76A2B.3 protein.
Length = 687
Score = 57.2 bits (132), Expect = 1e-08
Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 2/176 (1%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQA-IQAELLHVGYAVLIGDRRKF 476
+GD+G + N + I R K + A GE VAP IEQ I+ ++ Y + GD
Sbjct: 525 TGDIGEMLPNGTIRIIDRKKHIFKLAQGEYVAPEKIEQVYIRTPVVQQVY--VDGD---- 578
Query: 475 LSVLLTLKTKVSPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEA-GI 299
S+ L V PE D L ++W GS + K+ EI N + E I
Sbjct: 579 -SLERWLIAVVVPEP----DVL----KEWNDKQGSGSRKIEEICNDEKAKEFVLSELHAI 629
Query: 298 TRANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE 131
+ANK +++ ++V+K + F+V G L PTLK KR + KYKD + YK+
Sbjct: 630 GKANK--LNSIEQVKKVILTSDTFTVENGLLTPTLKAKRPQLRLKYKDGMAKVYKQ 683
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = -3
Query: 658 VLSGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLH 515
+L+GD+G +D +++TGRIKE LI G V PV IE + LLH
Sbjct: 421 LLTGDLGSIDDKGRIHVTGRIKE-LIKVNGMQVPPVEIEDVL---LLH 464
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQA 527
+GDVG +D + L I GR K+++I+ GGEN+ P IE AI +
Sbjct: 391 TGDVGSLDKDGYLTIGGRSKDMIIS-GGENIYPKEIEDAIDS 431
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLH 515
+GD+G VD +++TGRIKE LI G V PV IE + LLH
Sbjct: 423 TGDLGSVDQKGRVHVTGRIKE-LIKVNGMQVPPVEIEDVL---LLH 464
>AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical
protein Y65B4BL.5 protein.
Length = 719
Score = 37.9 bits (84), Expect = 0.007
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
Frame = -3
Query: 664 WLVLSGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLHVGYAVLIGDR 485
WL +GD+GR L I R K + + GE VAP IE I +V + + G+
Sbjct: 557 WLH-TGDIGRWTPEGTLKIVDRKKHIFKLSQGEYVAPEKIEN-IYVRSKYVAQSFVHGES 614
Query: 484 RKFLSVLLTLKTKVSPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEA 305
K + + + P E+ A +A G T E+ N+ AV KAI
Sbjct: 615 LKTCLIAIVV----------PDAEVLVPA---MADQGIKGT-FEELCNND--AVKKAILD 658
Query: 304 GITRANKHA-ISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE 131
+ K A + + ++V+ ++ FSV L PTLK KR + Y ++ Y +
Sbjct: 659 DMVAVGKKAGLFSFEQVRDISLSAEQFSVENDLLTPTLKSKRPKLKAHYSKQLDAMYSK 717
>Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical protein
R09E10.3 protein.
Length = 700
Score = 37.1 bits (82), Expect = 0.012
Identities = 47/174 (27%), Positives = 71/174 (40%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLHVGYAVLIGDRRKFL 473
+GD+GR + L I R K + G+ VAP L E ++ V + GD K
Sbjct: 530 TGDIGRFTAEGSLQIIDRRKNVFKMPQGKFVAPDLTE-SLYTSSSFVQQIYVHGDMEKPW 588
Query: 472 SVLLTLKTKVSPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITR 293
V + + PE L S A G + +L I D + + +E +T
Sbjct: 589 LVAIVVP---DPEY------LASYALTKHNINGKTYEQLCNIPILADDVLRQFVE--LTE 637
Query: 292 ANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE 131
+K + V + P FS G PTLK KRN + + +K I+ YK+
Sbjct: 638 EDKRP--RYEGVYGVHLTPVAFSAENGLTTPTLKNKRNAIAQFFKAEIDGMYKK 689
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 36.7 bits (81), Expect = 0.016
Identities = 39/173 (22%), Positives = 76/173 (43%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLHVGYAVLIGDRRKFL 473
+GD+G + L I R K+LL A GE ++ +E + +V + GD K
Sbjct: 562 TGDIGEFREDGSLKIIDRKKDLLKLAHGEYISLGKVETNLLTNP-NVDNVCVYGDSNKSF 620
Query: 472 SVLLTLKTKVSPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITR 293
V L + + + L +L S+A G+S ++ +D V +A++ + +
Sbjct: 621 LVALVVPNQKN------LTQLASKA-------GASNDNFEKLC--EDKKVVEALQKELAQ 665
Query: 292 ANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYK 134
+ + QK I ++ +G L LK+KR + + ++ +++ YK
Sbjct: 666 YGASKLQRVEIPQKIFICHEPWTPASGLLTEALKLKRKNIEKAFRKELDELYK 718
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLHVGYAVLIG--DRRK 479
SGD ++ + + I GR +++++ GGENV P IEQ + +L +V A ++G D R
Sbjct: 477 SGDTATMNEDGTINIVGRTRDMIVK-GGENVYPTEIEQFLH-KLDYVADAHVVGVPDDRY 534
Query: 478 FLSVLLTLKTKVSPETGEPLDELESEARKWVA 383
++ ++ +V E + ++ ++ +A
Sbjct: 535 GENICAWVRLRVEDEGKITAEHIKKACKRGMA 566
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQ 539
+GD+ + N + I GR K++++ GGEN+ P +EQ
Sbjct: 440 TGDIAVMHDNGTISIVGRSKDMIVR-GGENIYPTEVEQ 476
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQ 539
+GD+ + N + I GR K++++ GGEN+ P +EQ
Sbjct: 459 TGDIAVMHDNGTISIVGRSKDMIVR-GGENIYPTEVEQ 495
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQ 539
+GD+ + N + I GR K++++ GGEN+ P +EQ
Sbjct: 485 TGDIAVMHDNGTISIVGRSKDMIVR-GGENIYPTEVEQ 521
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 292 ANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE 131
A K +S ++ + P ++ TG L LK+KR + Y+ ++D YK+
Sbjct: 674 AKKSKLSRSEIPAAIHLCPEIWTPDTGLLTEALKLKRKPIQMAYQKTLDDLYKQ 727
>Z92849-14|CAE17857.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 376 GSSATKLSEIVNSKDPAVHKAIEAGITRANKH 281
G +S++V+S DP + E+G+ R ++H
Sbjct: 305 GLEVASISQVVSSPDPTIFATAESGLPRRHEH 336
>Z78414-4|CAE17982.1| 359|Caenorhabditis elegans Hypothetical
protein H12D21.11 protein.
Length = 359
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 376 GSSATKLSEIVNSKDPAVHKAIEAGITRANKH 281
G +S++V+S DP + E+G+ R ++H
Sbjct: 305 GLEVASISQVVSSPDPTIFATAESGLPRRHEH 336
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAI 533
+GD+ D N +I RIKE LI + VAP +E I
Sbjct: 413 TGDIVYFDKNGETFICDRIKE-LIKVNAKQVAPAELESVI 451
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQA 527
+GD R D + L+ITGR+ +L+ G ++ IE A+ A
Sbjct: 519 TGDGARRDEDGYLWITGRVDDLM-NVSGHLLSTAEIESALVA 559
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 652 SGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQA 527
+GD R D + L+ITGR+ +L+ G ++ IE A+ A
Sbjct: 529 TGDGARRDEDGYLWITGRVDDLM-NVSGHLLSTAEIESALVA 569
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 28.7 bits (61), Expect = 4.3
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Frame = -3
Query: 664 WLVLSGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAIQAELLHVGYAVLIGDR 485
WL +GD+G+ L I R E+ + G+ V+P+ IE AI A + LI
Sbjct: 487 WLH-TGDIGKWLPTGGLQIIDRKNEMFKLSQGDFVSPIQIE-AIYAN------SPLI--- 535
Query: 484 RKFLSVLLTLKTKVSPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEA 305
+ +T KT+ S G + +L + + + I+ +K+ V A+ A
Sbjct: 536 ---TQIYVTGKTERSFLVGIVVLDLPRFKQLPLVKALDGKESIEMIMENKE--VKNAVIA 590
Query: 304 GITR-ANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKDIIEDFYKE 131
+ + A ++ + + ++ + +F+ G + TLK +R ++ + + I YKE
Sbjct: 591 ELNKYAKQNGLQTIELIRNVHLTLQEFTEENGLITSTLKNRRKILEDYFAPQIAKMYKE 649
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 427 EPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANK 284
+PLD + +A K A++ TKL+E + DP V K I+ T+A +
Sbjct: 3209 QPLDVAKDDANKLKATV-EQLTKLAESSDKIDPQVAKDIKDSKTKAKE 3255
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 427 EPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANK 284
+PLD + +A K A++ TKL+E + DP V K I+ T+A +
Sbjct: 4112 QPLDVAKDDANKLKATV-EQLTKLAESSDKIDPQVAKDIKDSKTKAKE 4158
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 427 EPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANK 284
+PLD + +A K A++ TKL+E + DP V K I+ T+A +
Sbjct: 5066 QPLDVAKDDANKLKATV-EQLTKLAESSDKIDPQVAKDIKDSKTKAKE 5112
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 427 EPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANK 284
+PLD + +A K A++ TKL+E + DP V K I+ T+A +
Sbjct: 5969 QPLDVAKDDANKLKATV-EQLTKLAESSDKIDPQVAKDIKDSKTKAKE 6015
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 427 EPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANK 284
+PLD + +A K A++ TKL+E + DP V K I+ T+A +
Sbjct: 6872 QPLDVAKDDANKLKATV-EQLTKLAESSDKIDPQVAKDIKDSKTKAKE 6918
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 427 EPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANK 284
+PLD + +A K A++ TKL+E + DP V K I+ T+A +
Sbjct: 7775 QPLDVAKDDANKLKATV-EQLTKLAESSDKIDPQVAKDIKDSKTKAKE 7821
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 664 WLVLSGDVGRVDSNNLLYITGRIKELLITAGGENVAPVLIEQAI 533
WL +GD+G ++ + L+I R+KE LI G V P +E +
Sbjct: 419 WLH-TGDIGYLNEDGNLFIVDRLKE-LIKVKGLQVPPAELEDLL 460
>AC024805-5|AAK39339.1| 494|Caenorhabditis elegans Hypothetical
protein Y51H7C.6b protein.
Length = 494
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -3
Query: 334 DPAVHKAIEAGITRANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKD 155
+P +H +G+ K+ + + +K +K DF+ EL L+IK+ KD
Sbjct: 3 EPILHSKFLSGLPAGRKNGVRHGEKPEKVGEKQFDFTRKIRELRLELEIKKREEERIEKD 62
Query: 154 I 152
I
Sbjct: 63 I 63
>AC024805-4|ABA00170.1| 318|Caenorhabditis elegans Hypothetical
protein Y51H7C.6c protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -3
Query: 334 DPAVHKAIEAGITRANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKD 155
+P +H +G+ K+ + + +K +K DF+ EL L+IK+ KD
Sbjct: 3 EPILHSKFLSGLPAGRKNGVRHGEKPEKVGEKQFDFTRKIRELRLELEIKKREEERIEKD 62
Query: 154 I 152
I
Sbjct: 63 I 63
>AC024805-3|AAK39338.1| 801|Caenorhabditis elegans Hypothetical
protein Y51H7C.6a protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -3
Query: 334 DPAVHKAIEAGITRANKHAISNAQKVQKFAILPSDFSVYTGELGPTLKIKRNVVYEKYKD 155
+P +H +G+ K+ + + +K +K DF+ EL L+IK+ KD
Sbjct: 3 EPILHSKFLSGLPAGRKNGVRHGEKPEKVGEKQFDFTRKIRELRLELEIKKREEERIEKD 62
Query: 154 I 152
I
Sbjct: 63 I 63
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 304 GITRANKHAISNAQKVQKFAILPSDFSVYTGELGP 200
GI RANKH N + + A+LP V+ L P
Sbjct: 544 GILRANKHNGENITVLAQTALLPYSLKVFHKSLQP 578
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 304 GITRANKHAISNAQKVQKFAILPSDFSVYTGELGP 200
GI RANKH N + + A+LP V+ L P
Sbjct: 544 GILRANKHNGENITVLAQTALLPYSLKVFHKSLQP 578
>AC024751-8|AAK21510.3| 369|Caenorhabditis elegans Hypothetical
protein Y18H1A.7 protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = -3
Query: 442 SPETGEPLDELESEARKWVASLGSSATKLSEIVNSKDPAVHKAIEAGITRANKHAISNAQ 263
SPET + ++ RK V S+ KL E NS + A E I S +
Sbjct: 89 SPETAKSTPKV----RKPVEIPKISSEKLPETANSTENQDAPATEQTILNNRAAGSSPSP 144
Query: 262 KVQKFAILPSDFSVYTGELGPTLKIKR 182
K +FA PS+ + T ++ +KI +
Sbjct: 145 KSPRFAEKPSEIAKSTPKIRKLVKISK 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,808,819
Number of Sequences: 27780
Number of extensions: 260737
Number of successful extensions: 967
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -