Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12e11r
(337 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 73 8e-14
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 71 2e-13
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 63 5e-11
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 45 1e-05
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 42 1e-04
03_01_0463 + 3551764-3551897,3551989-3552046,3552148-3552255,355... 29 0.71
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 29 1.2
11_06_0715 + 26552962-26553510,26553578-26555746 28 1.6
07_01_0703 - 5295561-5297523,5299344-5299462 28 1.6
04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455 28 1.6
05_02_0150 - 7111090-7111225,7111251-7111458,7111705-7111774,711... 27 2.9
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261... 27 3.8
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936 27 3.8
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 3.8
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 27 3.8
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919... 27 5.0
02_01_0365 + 2621302-2621711,2622442-2622620,2623381-2623496,262... 27 5.0
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 27 5.0
11_04_0348 - 16632102-16632188,16632326-16632391,16632487-166325... 26 6.6
09_04_0689 - 19480409-19480599,19480780-19480889,19481032-194811... 26 6.6
07_03_0191 - 14920321-14920511,14920844-14921177 26 6.6
04_01_0081 - 890347-890603,890871-891204 26 6.6
02_05_0753 + 31510269-31510473,31510989-31511035,31511123-315111... 26 6.6
11_06_0368 + 22756988-22758205 26 8.7
10_08_0931 - 21647562-21649037 26 8.7
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 26 8.7
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 26 8.7
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 72.5 bits (170), Expect = 8e-14
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = -2
Query: 303 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 130
M L E F++ A+KV+ S+++ L LY LYKQAT+GDVN ++P + AKW AW
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60
Query: 129 NGRKGISQDDAKKQYIENAEKLHSKYA 49
+G S+++A YI ++L + A
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAA 87
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 71.3 bits (167), Expect = 2e-13
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -2
Query: 303 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 130
M L E F+Q A+K + S++ L LY LYKQAT+GDVN A+P + AKW AW
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60
Query: 129 NGRKGISQDDAKKQYIENAEKL 64
+G S+++A YI ++L
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQL 82
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 63.3 bits (147), Expect = 5e-11
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -2
Query: 303 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 130
M L E+F++ A+K + S+++ L LY LYKQAT+G V +P L + KW AW
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60
Query: 129 NGRKGISQDDAKKQYIENAEKL 64
+G S+++A YI ++L
Sbjct: 61 KAVEGKSKEEAMADYITKVKQL 82
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = -2
Query: 237 DDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIENAEK 67
+D L LY LY+QAT+G N+ +P VE +KW +W+G + +A + +++ E+
Sbjct: 37 NDVALLLYGLYQQATVGPCNVPKPRAWNPVEQSKWTSWHGLGSMPSAEAMRLFVKILEE 95
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -2
Query: 249 TKPSDDENLALYSLYKQATIGDVNIAQPSG--LVESAKWKAWNGRKGISQDDAKKQYIEN 76
T + L LY LYK AT G QPS L AKW AW+ + ++A ++YI
Sbjct: 109 TSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITV 168
Query: 75 AEKLHSKYA 49
++L ++
Sbjct: 169 VDELFPNWS 177
>03_01_0463 +
3551764-3551897,3551989-3552046,3552148-3552255,
3552664-3552721,3552788-3553014,3553085-3553145,
3553311-3553615
Length = 316
Score = 29.5 bits (63), Expect = 0.71
Identities = 20/93 (21%), Positives = 39/93 (41%)
Frame = -2
Query: 336 TLPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 157
T+ PD + DE + A++ + KP+ + +SLY AT ++ +
Sbjct: 189 TVFPDAEARLSQPKDETWSDCAEQ--GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPV 246
Query: 156 VESAKWKAWNGRKGISQDDAKKQYIENAEKLHS 58
++ KW A S D+ ++ + E H+
Sbjct: 247 IQGEKWSATKWIHVRSYDENGRRSSDKCEDQHA 279
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 119 LRPFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQFLTLSATCLNCSSR 298
LR + +A+ R L + + SP++ CL YS R L L L C+ C +
Sbjct: 230 LRELGLYCVAMEDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICM-CIAE 288
Query: 299 DI 304
DI
Sbjct: 289 DI 290
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +1
Query: 202 LVQGVQRKVLIVTGLGLP---VPNLIGDLFEL 288
LV G R + ++ +GLP +PN+IGDLF L
Sbjct: 560 LVAGKCRYMSVLELIGLPKDNIPNVIGDLFNL 591
>07_01_0703 - 5295561-5297523,5299344-5299462
Length = 693
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 206 YREYSARFSSSLGLVFQFLTLSAT--CLNCSSRDILCYLLRSGGR 334
+RE A+ + +G + Q L+ C NCS +L L +S GR
Sbjct: 454 FREDDAQLAEEIGDLVQLRVLNVVLNCSNCSEAKVLTELAKSMGR 498
>04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455
Length = 300
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 332 YLLISKDNT-KCLSTSNSNRSPIRLGTGRPSP 240
+L+IS NT K L++ S+ SP +LG G P P
Sbjct: 124 FLIISLRNTNKGLTSLQSSSSPTKLGDGLPLP 155
>05_02_0150 -
7111090-7111225,7111251-7111458,7111705-7111774,
7112290-7112367
Length = 163
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 185 MLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSKMRRNSTPNTH 48
M+ SP W AP G G +A+ P+ S NTH
Sbjct: 35 MVINSSPKHTWFAPVGNKGALARIQPQVTELEGKVTSLSTSMENTH 80
>08_02_0818 -
21524539-21524664,21524911-21524961,21525800-21526170,
21526497-21526852,21527926-21527996
Length = 324
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -2
Query: 276 VADKVRNWKTKP----SDDENLALYSLYKQAT 193
V D++ W P +D+EN + +LYK+AT
Sbjct: 241 VKDRIEEWYRPPWDRTADEENASFNALYKEAT 272
>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
Length = 838
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 40 NNLCVFGVEFLRIFDVLLLGIVLGDAFATVP-CLPLGALHKTAGLGNVNITYGSLLVQGV 216
NN C F + L++F L L +FA C LG +T L +V G+ L G
Sbjct: 76 NNYCKFDDQRLQLFTSSLYLAALAASFAASRLCTRLGR-RRTMQLASVFFLGGTALCAGA 134
Query: 217 QRKVLIVTG 243
+++ G
Sbjct: 135 ANLAMLIVG 143
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 234 DENLALYSLYKQATIGDVNIAQPSGLVES 148
DE+ AL +L+ A + VNI QPS +VES
Sbjct: 476 DESSALDALHTLADLS-VNILQPSSIVES 503
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 255 WKTKPSDDENLALYSLYKQATIGDVNIAQ 169
WK S ++NLA +++Y T V++ Q
Sbjct: 138 WKVSRSSEQNLAFFAVYNMETTDIVSLYQ 166
>03_06_0051 +
31290431-31290610,31290727-31290849,31291771-31291928,
31292395-31292497,31293077-31293172,31293367-31293432,
31293500-31293619,31293905-31293991
Length = 310
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -2
Query: 270 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 133
+K K KP + L YSL TI ++ +++ KW A
Sbjct: 254 EKCIGLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVA 299
>02_01_0365 +
2621302-2621711,2622442-2622620,2623381-2623496,
2623626-2623964,2624113-2624307,2624505-2624594,
2625288-2625518,2625632-2625952
Length = 626
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 261 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDDAK-KQY 85
R K K +DE+ + + K+A + I Q L+++ WNG S++ K ++
Sbjct: 90 RKHKQKRKNDESDEVSRMEKRARYLLIKIKQEQNLLDAYSGDGWNGH---SREKIKPEKE 146
Query: 84 IENAEKLHSKY 52
++ A+K KY
Sbjct: 147 LQRAKKQIMKY 157
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -2
Query: 333 LPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 157
L P + K D FK+ D+V +W T D+ N+A Y + + P G+
Sbjct: 161 LSPRILEDFKAYADVCFKEFGDRVAHWIT--IDEPNVASIGSYDSGQLAPGRCSDPFGI 217
>11_04_0348 -
16632102-16632188,16632326-16632391,16632487-16632571,
16632951-16633044,16633417-16633474,16633767-16633807,
16633919-16634018
Length = 176
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -2
Query: 192 IGDVNIAQPSGLVESAKWKAWNGRKGISQDDAKKQYIENAEKLHSKY 52
+G VN+ + K+ + ++ ++ D+A+ IE AEK+H+++
Sbjct: 75 LGKVNVMYEDDMELMVKFYQFVAKEEMAIDEAELDPIEFAEKIHAQH 121
>09_04_0689 -
19480409-19480599,19480780-19480889,19481032-19481117,
19481410-19481523,19481697-19482066,19482216-19482346,
19482628-19482736,19482901-19483022,19483113-19483219,
19483447-19483551,19483654-19483812,19484071-19484126,
19484200-19484251,19486724-19486821,19487086-19487210
Length = 644
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 256 VPNLIGDLFELLVERHFVLSF 318
VP G+ ++LL E+HFVL +
Sbjct: 447 VPVTAGNFYKLLAEKHFVLLY 467
>07_03_0191 - 14920321-14920511,14920844-14921177
Length = 174
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = -3
Query: 176 LPSPA-VLWRAP---SGRHGTVAKASPKTMPRSNTSKMRRNSTP 57
L PA V WR P SGRH T A P + T +R P
Sbjct: 46 LSDPAQVWWRCPLPASGRHATTVAALAALSPDTMTHPLRLRPLP 89
>04_01_0081 - 890347-890603,890871-891204
Length = 196
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = -3
Query: 176 LPSPA-VLWRAP---SGRHGTVAKASPKTMPRSNTSKMRRNSTP 57
L PA V WR P SGRH T A P + T +R P
Sbjct: 46 LSDPAQVWWRCPLPASGRHATTVAALAALSPDTMTHPLRLRPLP 89
>02_05_0753 +
31510269-31510473,31510989-31511035,31511123-31511177,
31511282-31511354,31511441-31511528,31511658-31511740,
31511841-31511970,31512183-31512261,31512409-31512473,
31512581-31512682
Length = 308
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 240 SDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDDAKK 91
SD ALY +A IG + +A+P+ + ++A W G K ++ AKK
Sbjct: 19 SDRRRSALYGGEGRARIGSLRVAEPA-VAKAAVWA--RGSKPVAPLRAKK 65
>11_06_0368 + 22756988-22758205
Length = 405
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 160 SCGERQVEGMERSQRHLPRRCQEAIHRKCGETPLQIRIN 44
SC E + L RC+ A HR C +T L+ +N
Sbjct: 221 SCAVCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVN 259
>10_08_0931 - 21647562-21649037
Length = 491
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 176 LPSPAVLWRAPSGRHGTVAKASPKTMPR 93
LPSP + WR+ SGR A + P P+
Sbjct: 214 LPSP-IPWRSRSGRFDASAPSPPSPSPK 240
>09_03_0179 -
13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 134 HGTVAKASPKTMPRSNTSKMRRNS 63
HGT A K MP NTS+ NS
Sbjct: 413 HGTSDAAGSKKMPTGNTSQNMTNS 436
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = -3
Query: 290 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 111
+ S+RSP+ T +RL + L PA + A G HG AS
Sbjct: 52 AGSSRSPVFSSLVEDDGETRHLQALDGADTRLRLFQMDLLDPASITPAVDGAHGVFHLAS 111
Query: 110 PKTM 99
P T+
Sbjct: 112 PLTL 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,566,081
Number of Sequences: 37544
Number of extensions: 237991
Number of successful extensions: 860
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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