Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e09f
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04058-1|AAA52406.1|  333|Homo sapiens ETFA protein.                  191   1e-48
BT009796-1|AAP88798.1|  333|Homo sapiens electron-transfer-flavo...   191   1e-48
BC095457-1|AAH95457.1|  333|Homo sapiens electron-transfer-flavo...   191   1e-48
BC015526-1|AAH15526.1|  333|Homo sapiens electron-transfer-flavo...   191   1e-48
AF436657-1|AAN03712.1|  333|Homo sapiens electron transfer flavo...   191   1e-48
BC038808-1|AAH38808.1|  373|Homo sapiens apolipoprotein B mRNA e...    30   6.7  
DQ146365-1|AAZ38720.1|  373|Homo sapiens apolipoprotein B mRNA e...    29   8.8  

>J04058-1|AAA52406.1|  333|Homo sapiens ETFA protein.
          Length = 333

 Score =  191 bits (466), Expect = 1e-48
 Identities = 92/146 (63%), Positives = 115/146 (78%)
 Frame = +2

Query: 137 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 316
           +  L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC   A+ + K  G
Sbjct: 13  AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72

Query: 317 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 496
           I+KVLVA+ DV+KG   E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73  IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132

Query: 497 TDIIGIKDANTFVRTIYAGNAILTLE 574
           +DII IK  +TFVRTIYAGNA+ T++
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVK 158


>BT009796-1|AAP88798.1|  333|Homo sapiens
           electron-transfer-flavoprotein, alpha polypeptide
           (glutaric aciduria II) protein.
          Length = 333

 Score =  191 bits (466), Expect = 1e-48
 Identities = 92/146 (63%), Positives = 115/146 (78%)
 Frame = +2

Query: 137 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 316
           +  L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC   A+ + K  G
Sbjct: 13  AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72

Query: 317 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 496
           I+KVLVA+ DV+KG   E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73  IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132

Query: 497 TDIIGIKDANTFVRTIYAGNAILTLE 574
           +DII IK  +TFVRTIYAGNA+ T++
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVK 158


>BC095457-1|AAH95457.1|  333|Homo sapiens
           electron-transfer-flavoprotein, alpha polypeptide
           (glutaric aciduria II) protein.
          Length = 333

 Score =  191 bits (466), Expect = 1e-48
 Identities = 92/146 (63%), Positives = 115/146 (78%)
 Frame = +2

Query: 137 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 316
           +  L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC   A+ + K  G
Sbjct: 13  AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72

Query: 317 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 496
           I+KVLVA+ DV+KG   E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73  IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132

Query: 497 TDIIGIKDANTFVRTIYAGNAILTLE 574
           +DII IK  +TFVRTIYAGNA+ T++
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVK 158


>BC015526-1|AAH15526.1|  333|Homo sapiens
           electron-transfer-flavoprotein, alpha polypeptide
           (glutaric aciduria II) protein.
          Length = 333

 Score =  191 bits (466), Expect = 1e-48
 Identities = 92/146 (63%), Positives = 115/146 (78%)
 Frame = +2

Query: 137 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 316
           +  L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC   A+ + K  G
Sbjct: 13  AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72

Query: 317 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 496
           I+KVLVA+ DV+KG   E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73  IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132

Query: 497 TDIIGIKDANTFVRTIYAGNAILTLE 574
           +DII IK  +TFVRTIYAGNA+ T++
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVK 158


>AF436657-1|AAN03712.1|  333|Homo sapiens electron transfer
           flavoprotein alpha-subunit protein.
          Length = 333

 Score =  191 bits (466), Expect = 1e-48
 Identities = 92/146 (63%), Positives = 115/146 (78%)
 Frame = +2

Query: 137 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 316
           +  L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC   A+ + K  G
Sbjct: 13  AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72

Query: 317 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 496
           I+KVLVA+ DV+KG   E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73  IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132

Query: 497 TDIIGIKDANTFVRTIYAGNAILTLE 574
           +DII IK  +TFVRTIYAGNA+ T++
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVK 158


>BC038808-1|AAH38808.1|  373|Homo sapiens apolipoprotein B mRNA
           editing enzyme, catalytic polypeptide-like 3F protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 272 FQPQALRHHLQFSWQHSMYFGLLEIVPHCCARRA-LKYFAND 150
           F  + ++HH   SW+  ++   ++   HC A R  L +F +D
Sbjct: 220 FTMEVVKHHSPISWKRGVFRNQVDPETHCHAERCFLSWFCDD 261


>DQ146365-1|AAZ38720.1|  373|Homo sapiens apolipoprotein B mRNA
           editing enzyme, catalytic polypeptide-like 3F protein.
          Length = 373

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 272 FQPQALRHHLQFSWQHSMYFGLLEIVPHCCARRA-LKYFAND 150
           F  + ++HH   SW+  ++   ++   HC A R  L +F +D
Sbjct: 220 FTMEVVKHHSPVSWKRGVFRNQVDPETHCHAERCFLSWFCDD 261


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,507,666
Number of Sequences: 237096
Number of extensions: 1628299
Number of successful extensions: 12072
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12072
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)