Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e08r
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   9.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 36  FLLHFGTAFWRCAGR 80
           F+LH     WRC  R
Sbjct: 152 FMLHCNNTTWRCLYR 166


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 83  VGPRCDSDV 109
           VGPRC+ D+
Sbjct: 291 VGPRCEGDI 299


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +2

Query: 17   MH-GWLTIPSSLWNS 58
            MH  W T PS+ W+S
Sbjct: 1031 MHPDWTTKPSTWWSS 1045


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 313 YFTLLSGCGNQENFNLFLRI 254
           Y   LSG G+     LFL +
Sbjct: 561 YDVSLSGLGSDRRLELFLEL 580


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,841
Number of Sequences: 336
Number of extensions: 1396
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)