Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e07r
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000242-1|AAH00242.1|  190|Homo sapiens mitochondrial ribosomal...    91   4e-18
AF151896-1|AAD34133.1|  153|Homo sapiens CGI-138 protein protein.      90   6e-18
BC005149-1|AAH05149.1|  580|Homo sapiens mucolipin 1 protein.          33   1.2  
AK222673-1|BAD96393.1|  580|Homo sapiens mucolipin 1 variant pro...    33   1.2  
AK026102-1|BAB15360.1|  580|Homo sapiens protein ( Homo sapiens ...    33   1.2  
AJ293970-1|CAC08215.1|  580|Homo sapiens mucolipidin protein.          33   1.2  
AJ293659-1|CAC07813.1|  545|Homo sapiens mucolipidin protein.          33   1.2  
AF305579-1|AAG42242.1|  581|Homo sapiens mucolipin 1 protein.          33   1.2  
AF287270-1|AAG00798.1|  580|Homo sapiens mucolipin protein.            33   1.2  
AF287269-1|AAG00797.1|  580|Homo sapiens mucolipin protein.            33   1.2  
AF249319-1|AAG10422.1|  580|Homo sapiens mucolipidosis type IV p...    33   1.2  
AB037766-1|BAA92583.1| 1532|Homo sapiens KIAA1345 protein protein.     31   3.8  
AK222653-1|BAD96373.1|  523|Homo sapiens dynein light chain-A va...    30   8.7  

>BC000242-1|AAH00242.1|  190|Homo sapiens mitochondrial ribosomal
           protein S23 protein.
          Length = 190

 Score = 90.6 bits (215), Expect = 4e-18
 Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
 Frame = -3

Query: 557 MASSRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKYARPNL----VVK 390
           MA SRLE +G+IF+R   L+  G +K  ++PLWFDVY AFPP+ EP + RP +       
Sbjct: 1   MAGSRLETVGSIFSRTRDLVRAGVLK--EKPLWFDVYDAFPPLREPVFQRPRVRYGKAKA 58

Query: 389 EIRPILYKEDVLRAKFHS-NGYGLAPVSLLNQSNETQTKRLVQQYDELKAEG-IPEDEII 216
            I+ I Y ED +RAKF+S  G G     L N + ++  +R V++Y EL+  G   E+++ 
Sbjct: 59  PIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQKLGETDEEKLF 118

Query: 215 EKAAQAVAVE 186
            +  +A+  E
Sbjct: 119 VETGKALLAE 128


>AF151896-1|AAD34133.1|  153|Homo sapiens CGI-138 protein protein.
          Length = 153

 Score = 90.2 bits (214), Expect = 6e-18
 Identities = 62/155 (40%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
 Frame = -3

Query: 557 MASSRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKYARPNL----VVK 390
           MA SRLE +G IF+R   L+  G +K  ++PLWFDVY AFPP+ EP + RP +       
Sbjct: 1   MAGSRLETVGCIFSRTRDLVRAGVLK--EKPLWFDVYDAFPPLREPVFQRPRVRYGKAKA 58

Query: 389 EIRPILYKEDVLRAKFHS-NGYGLAPVSLLNQSNETQTKRLVQQYDELKAEGIPEDE--I 219
            I+ I Y ED +RAKF+S  G G     L N + ++  +R V++Y EL+  G  ++E   
Sbjct: 59  PIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQKLGETDEEKLF 118

Query: 218 IE--KAAQAVAVERHSYAAQKLN---VT-PKNPDS 132
           +E  KA  A  V       Q LN   VT P NP++
Sbjct: 119 VETGKALLAEGVILRRVGEQGLNTEVVTFPGNPNT 153


>BC005149-1|AAH05149.1|  580|Homo sapiens mucolipin 1 protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AK222673-1|BAD96393.1|  580|Homo sapiens mucolipin 1 variant
           protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AK026102-1|BAB15360.1|  580|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22449 fis, clone HRC09609. ).
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AJ293970-1|CAC08215.1|  580|Homo sapiens mucolipidin protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AJ293659-1|CAC07813.1|  545|Homo sapiens mucolipidin protein.
          Length = 545

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 351 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 410


>AF305579-1|AAG42242.1|  581|Homo sapiens mucolipin 1 protein.
          Length = 581

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 387 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 446


>AF287270-1|AAG00798.1|  580|Homo sapiens mucolipin protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AF287269-1|AAG00797.1|  580|Homo sapiens mucolipin protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AF249319-1|AAG10422.1|  580|Homo sapiens mucolipidosis type IV
           protein protein.
          Length = 580

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
 Frame = +3

Query: 48  CVLIL*SSTLFV-VENIFYISF--SQYLGCNGIRIFRCNI-QFLCSIAVAFDGYCLCGFL 215
           C ++L +STL V V  I Y++F  +  +    +R+   ++ +F C +AV + GYC CG++
Sbjct: 386 CSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWI 445


>AB037766-1|BAA92583.1| 1532|Homo sapiens KIAA1345 protein protein.
          Length = 1532

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
 Frame = -3

Query: 398  VVKEIRPILYKEDVLRAKFHSNGYGLAPVSLLNQSNETQTKR-LVQQYDELKAEGIPEDE 222
            V ++    L   +V+  K H + +       L Q  E+   R L+ +   L A+ I E+E
Sbjct: 912  VFQDYEKRLRDRNVIETKEHIDTHRAIVAKYLQQVRESVINRFLIAKQYFLLADMIVEEE 971

Query: 221  IIEKAAQAVAVERHSYAAQKLNVTPKNPDSVTAQVLAEADIKNIFN 84
            +   +   +++ + +   + L    K    VTAQ L++ DIK + N
Sbjct: 972  VPNISILGLSLFKLAEQKRPLRPRRKGRKKVTAQNLSDGDIKLLVN 1017


>AK222653-1|BAD96373.1|  523|Homo sapiens dynein light chain-A
           variant protein.
          Length = 523

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +3

Query: 471 VIRFHCSSAKKTFNSGKYCTNSFQSATGHVKKFFLKLLARLIYVSLMQTNNLFLDF-FIK 647
           V+   C +         Y    F     H++KF L+  A LIY S+ +  N+ L + +I 
Sbjct: 242 VVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIV 301

Query: 648 SKL 656
            KL
Sbjct: 302 QKL 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,975,373
Number of Sequences: 237096
Number of extensions: 1701005
Number of successful extensions: 3337
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3333
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)