Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e04f
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   2.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.9  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 118 TLNWLPRT 141
           TLNWLPRT
Sbjct: 39  TLNWLPRT 46


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 137  EHRQTQRVGPWKPHLRHPARKHDRHLAGIAETS 235
            + +Q Q+    +   +H AR+ +   AGIAETS
Sbjct: 1218 QQQQQQQQQQQQQQQQHQAREREGVGAGIAETS 1250


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 240 ADGDGKVTQDEWLALWDEYAKDPAAAKDWQNLL 338
           A G G    D+WLA  +     P+AA   Q+++
Sbjct: 77  AAGKGAARSDDWLANANSPVGSPSAALQPQHVV 109


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 364 TPAMMVQSMSTST*PCTSLLVS 429
           TP   V SMS +T P TSL  S
Sbjct: 841 TPTTSVISMSGTTVPITSLPAS 862


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 297 AKDPAAAKDWQNLLCKSIFQIQD 365
           A DPA  +DW++    ++ ++ D
Sbjct: 853 ASDPAVYEDWRHWKFPNLVEVLD 875


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 133 PRTSPNSEGGPLEAPPTTSCKKA*SPSG 216
           PR SPN+   P E   +T+   A SP G
Sbjct: 738 PR-SPNASPSPAEQCASTTTITARSPQG 764


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 246 HQRRLVSAIPARW 208
           H +RLV  +P RW
Sbjct: 696 HTQRLVVHVPPRW 708


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = +3

Query: 234 ADADGDGKVTQDEWLALWDEYAKDPAAAKDWQNLLCKSIFQIQDSSNDG 380
           A+  G GK  +  + A W+E+        D     CK I     +  +G
Sbjct: 560 AEKTGLGKGPRTTYCAFWNEFLPKLKGIPDPXPNTCKVIASSVSAGEEG 608


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,999
Number of Sequences: 438
Number of extensions: 3882
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)