Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e03f
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2421|AAF53348.1|  250|Drosophila melanogaster CG7968-PA...    32   0.46 
AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-P...    29   5.6  
AY089495-1|AAL90233.1|  126|Drosophila melanogaster GH06755p pro...    28   7.4  
AE013599-1312|AAS64917.1|   84|Drosophila melanogaster CG33472-P...    28   7.4  
AY119038-1|AAM50898.1|  851|Drosophila melanogaster LP06141p pro...    28   9.8  
AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p pro...    28   9.8  
AE014297-4669|AAF57090.4|  851|Drosophila melanogaster CG15544-P...    28   9.8  

>AE014134-2421|AAF53348.1|  250|Drosophila melanogaster CG7968-PA
           protein.
          Length = 250

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +2

Query: 248 FSASGTVAHLALEGASNVVVNDVTFNILRSKFSVDLTLPKLSASSV--AVNGEATIFGRE 421
           F  +G    L +EG      + + +N +      D+  PK+S  S    +N  A +FG +
Sbjct: 66  FGCNGNFTDLIIEGLDGYEFSKLEWNNILHTIKFDMNFPKISLKSTNYKLNLLARLFGAD 125

Query: 422 LAVASSGSLVVE 457
            ++   G+L +E
Sbjct: 126 FSLWGDGALSLE 137


>AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-PA
            protein.
          Length = 3135

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 23/54 (42%), Positives = 31/54 (57%)
 Frame = +2

Query: 236  ISDIFSASGTVAHLALEGASNVVVNDVTFNILRSKFSVDLTLPKLSASSVAVNG 397
            +SDI S     A +A+ G  +   +    NIL SK  +DL+LPKL A S+ VNG
Sbjct: 2669 LSDILSLPEVDASIAVNGDESRSASIKDTNIL-SK--IDLSLPKLDA-SLNVNG 2718


>AY089495-1|AAL90233.1|  126|Drosophila melanogaster GH06755p
           protein.
          Length = 126

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 417 GNWL*PVVEALLSKTFVWSPQSA*DCYLAS 506
           GNWL  +   +   TF+W PQ++ +C   S
Sbjct: 9   GNWLLVLTAVIGFLTFIWIPQTSAECQTRS 38


>AE013599-1312|AAS64917.1|   84|Drosophila melanogaster CG33472-PA
           protein.
          Length = 84

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 417 GNWL*PVVEALLSKTFVWSPQSA*DCYLAS 506
           GNWL  +   +   TF+W PQ++ +C   S
Sbjct: 9   GNWLLVLTAVIGFLTFIWIPQTSAECQTRS 38


>AY119038-1|AAM50898.1|  851|Drosophila melanogaster LP06141p
           protein.
          Length = 851

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
 Frame = -1

Query: 312 SLTTTLLAPSRAKWATVPDALKMSEIGKV*SPSAFSM*IGSSPRSWIPEVMRSMTF---- 145
           +LTTT   P  +  ++ P +   SE   + + + F + + S PR   P ++  + F    
Sbjct: 386 TLTTTAATPLGSTTSSSPSSTSTSEKPPL-AATTF-VPLRSRPR---PAIVSRIAFGEAQ 440

Query: 144 TINCSTKFCLSLSRSTFEGTAATLAARVTS 55
           + + +T    S + +T  GTAAT+A+RVT+
Sbjct: 441 STSTTTAATPSSTAATSSGTAATVASRVTT 470


>AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p
           protein.
          Length = 518

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -3

Query: 325 VESDVIDDNVAGAFESQVGYGARCAEDVRNWES-VIAFGFFDVDWVESTLLDTGSDAIDD 149
           +E+D    + AG         A  AED    ES +I   F   D +      T  D  DD
Sbjct: 231 IEADETGTSGAGVDLGDDDVDADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMDDDDD 290

Query: 148 VHNQLLDQ 125
           VH+QL+D+
Sbjct: 291 VHDQLVDE 298


>AE014297-4669|AAF57090.4|  851|Drosophila melanogaster CG15544-PA
           protein.
          Length = 851

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
 Frame = -1

Query: 312 SLTTTLLAPSRAKWATVPDALKMSEIGKV*SPSAFSM*IGSSPRSWIPEVMRSMTF---- 145
           +LTTT   P  +  ++ P +   SE   + + + F + + S PR   P ++  + F    
Sbjct: 386 TLTTTAATPLGSTTSSSPSSTSTSEKPPL-AATTF-VPLRSRPR---PAIVSRIAFGEAQ 440

Query: 144 TINCSTKFCLSLSRSTFEGTAATLAARVTS 55
           + + +T    S + +T  GTAAT+A+RVT+
Sbjct: 441 STSTTTAATPSSTAATSSGTAATVASRVTT 470


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,529,335
Number of Sequences: 53049
Number of extensions: 449395
Number of successful extensions: 1474
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)