Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12e02f
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.1  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 138 LIWQVCHFFAILLCITSNVLFMKVDIRFYFCYIQCTT 28
           +++ + +F     CI+     +  D  FY C IQ  T
Sbjct: 162 VVFDLVYFILAFACISIAYTNVSTDAFFYTCLIQIET 198


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = -3

Query: 195 INFLFTTLTGCSTCLCVFNLIWQVCHFFAILLCITSNVLFMKVDIRFYFCYIQCTTIKQT 16
           ++FL  T T    C+ V +      H   I L     +++   D+ FY C++ C+TI + 
Sbjct: 606 VSFLLITQTIFIICVIVQSEQIAWLHLLYIFLV---GIMYA-ADV-FYICHVCCSTIHEV 660

Query: 15  N 13
           +
Sbjct: 661 S 661


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 124 LPFFCNSVMYYF*CSFYESRY*VLFLL 44
           +P F    +YYF C+F      +LFLL
Sbjct: 138 VPLFFLLCIYYFYCAFIIFTVHLLFLL 164


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 445 LSCYVYLCLWFWFLE 401
           ++C +YL   FWF++
Sbjct: 221 INCLIYLIGGFWFMQ 235


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 484 KVEYSKSSRATCPEC 528
           KV   +  R TCP+C
Sbjct: 222 KVHIREDKRLTCPKC 236


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 4/9 (44%), Positives = 7/9 (77%)
 Frame = -2

Query: 436 YVYLCLWFW 410
           Y  +C+W+W
Sbjct: 291 YYVMCIWYW 299


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 4/9 (44%), Positives = 7/9 (77%)
 Frame = -2

Query: 436 YVYLCLWFW 410
           Y  +C+W+W
Sbjct: 291 YYVMCIWYW 299


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 4/12 (33%), Positives = 9/12 (75%)
 Frame = -2

Query: 430 YLCLWFWFLEWA 395
           +L  W+W ++W+
Sbjct: 625 HLDAWYWVMDWS 636


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,338
Number of Sequences: 336
Number of extensions: 2724
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)