BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12e02f (608 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0634 + 30746767-30747012,30747083-30747118,30747554-307478... 54 7e-08 07_03_0061 + 12972944-12973054,12974509-12974536,12974701-129748... 46 3e-05 02_05_0773 + 31654985-31655365,31655486-31655610,31655712-316560... 30 1.2 >01_06_0634 + 30746767-30747012,30747083-30747118,30747554-30747850, 30748482-30748544,30748643-30748696,30748837-30748854, 30749554-30749625,30749731-30749787,30750160-30750236, 30751013-30751094,30751585-30751701,30752083-30752210, 30753074-30753143,30753725-30753765,30753963-30753990, 30754151-30754210 Length = 481 Score = 54.4 bits (125), Expect = 7e-08 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Frame = +1 Query: 139 VEYAKTGRAACKGCKQKIDQGSLRIAVMVQS-AFFDGKQPNWHHEDCF-FKKRRLNSFTE 312 VEYAK+GR++CK C + I +G+LR+ + FD + W+H CF ++ + Sbjct: 17 VEYAKSGRSSCKVCSEGIAKGALRLGASARDPRGFDSTK--WYHVACFPSSSHPIDPVEK 74 Query: 313 IANFNVLKNEDQKRIK---TTIENSAGAVVMPIQEXXXXXXXXXXXXXXPESDNSALKDF 483 + F+ +K ED++ ++ T + AV + ++N ++ Sbjct: 75 VKGFDSIKEEDREEVRELNKTCKRDHTAVGTTEESSPKKVKASPGV-----AENVSI--- 126 Query: 484 KVEYSKSSRATCPECEIKICKDEIRI 561 VEY+KS R+TC C I +R+ Sbjct: 127 SVEYAKSGRSTCKGCSESIAAGALRL 152 Score = 46.8 bits (106), Expect = 1e-05 Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +1 Query: 139 VEYAKTGRAACKGCKQKIDQGSLRIAVMVQS-AFFDGKQPNWHHEDCF 279 VEYAK+GR+ CKGC + I G+LR+ ++ FD + W+H CF Sbjct: 128 VEYAKSGRSTCKGCSESIAAGALRLGASIRDPRGFDSTK--WYHIACF 173 >07_03_0061 + 12972944-12973054,12974509-12974536,12974701-12974870, 12975878-12976043,12976122-12976425,12977155-12977350, 12977464-12977622,12978311-12978371,12978904-12978967, 12979099-12979346,12980039-12980250,12980344-12980456, 12980547-12980623,12980710-12980873,12981493-12981564, 12981565-12981760,12981813-12981854,12982358-12982440, 12982534-12982671,12982942-12983124,12983216-12983263 Length = 944 Score = 45.6 bits (103), Expect = 3e-05 Identities = 20/81 (24%), Positives = 44/81 (54%) Frame = +1 Query: 139 VEYAKTGRAACKGCKQKIDQGSLRIAVMVQSAFFDGKQPNWHHEDCFFKKRRLNSFTEIA 318 +E AK+ R +C+ C +KI +G++R+ S+ +G+ W+H CF + + + Sbjct: 82 IEVAKSARTSCRRCGEKIKKGTVRV-----SSKLEGQ--GWYHASCFLEMSPAATVENFS 134 Query: 319 NFNVLKNEDQKRIKTTIENSA 381 + +L +ED++ + ++ A Sbjct: 135 GWEILSHEDKRAVLDLVKKDA 155 Score = 37.5 bits (83), Expect = 0.008 Identities = 14/35 (40%), Positives = 25/35 (71%) Frame = +1 Query: 475 KDFKVEYSKSSRATCPECEIKICKDEIRICKILYD 579 K +K EY+KS R++C C I KD++R+ K++++ Sbjct: 6 KAWKAEYAKSGRSSCKSCRSPIGKDQLRLGKMMWN 40 Score = 36.3 bits (80), Expect = 0.019 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +1 Query: 133 YQVEYAKTGRAACKGCKQKIDQGSLRIAVMV 225 ++ EYAK+GR++CK C+ I + LR+ M+ Sbjct: 8 WKAEYAKSGRSSCKSCRSPIGKDQLRLGKMM 38 >02_05_0773 + 31654985-31655365,31655486-31655610,31655712-31656026, 31656145-31656314,31656408-31656751 Length = 444 Score = 30.3 bits (65), Expect = 1.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 181 KQKIDQGSLRIAVMVQSAFFDGKQPNWHH 267 K + D GS+ + V+ S F D QP WH+ Sbjct: 355 KDEPDVGSVDLPVLAVSGFLDAAQPIWHN 383 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,491,833 Number of Sequences: 37544 Number of extensions: 230390 Number of successful extensions: 564 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 554 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 564 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1454766756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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