Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12e01f
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 50 9e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 48 5e-06
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 44 8e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 43 1e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 3e-04
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 42 4e-04
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 41 7e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.004
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.012
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.016
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.016
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.016
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.021
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.021
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.027
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.027
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.047
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 34 0.063
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 34 0.063
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.11
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 33 0.11
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.14
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.14
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 32 0.25
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.44
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 28 4.1
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 5.4
SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 27 7.2
SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 27 9.5
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_39522| Best HMM Match : PAN (HMM E-Value=0.0005) 27 9.5
SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+R++GG A GA P IAL + ICG SL+++T VTAAHC R + Q+
Sbjct: 475 SRVIGGKDAIPGAWPWQ----IALKSRGNFICGGSLVSSTWVVTAAHC-VARSSNPAQYQ 529
Query: 364 LALGTANIFSGGTRVTTSNVQ---MHGSYNMDTLHNDVAII 477
+ +G N T NV+ H YN L ND+A+I
Sbjct: 530 IIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALI 570
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 50.4 bits (115), Expect = 9e-07
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+RIVGG+AAN G P A L T G CG SL+ + +TAAHC ++R +
Sbjct: 389 SRIVGGAAANPGDWPWQAQL--RTTTG-FPYCGGSLIHSNWVLTAAHCISSKR--PAEVV 443
Query: 364 LALGTANIFSGGTR----VTTSNVQMHGSYNMDTLHNDVAII 477
+ LG + T + S + H +YN T++ND+A++
Sbjct: 444 VRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL 485
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 48.0 bits (109), Expect = 5e-06
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQ-ARQF 360
+RIVGG+ A G P A L+ G CG +L+ VTA+HC R + +
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 361 TLALGTAN---IFSGGTRVTTSNVQMHGSYNM--DTLHNDVAII 477
++LG N I S R+ + + +H YN+ +NDVA+I
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALI 312
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/97 (34%), Positives = 47/97 (48%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTL 366
RIV G A PH ++ + ICGASLLT ++TAAHC T A +TL
Sbjct: 240 RIVNGE----DAVPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHC-LTLSDDASDYTL 294
Query: 367 ALGTANIFSGGTRVTTSNVQMHGSYNMDTLHNDVAII 477
G + G S ++ H ++M + NDVA++
Sbjct: 295 VAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALL 331
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 44.0 bits (99), Expect = 8e-05
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 360
GTRI+ G A + P L + ++ CGASLL+ ++TAAHC + R + +
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLRVYGSHN----CGASLLSPGWALTAAHCVQ-RSSNPADY 137
Query: 361 TLALGT-ANIFSGGTRV-TTSNVQMHGSYNMDTLHNDVAII 477
TLA G + +V S V H ++M L NDV ++
Sbjct: 138 TLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLL 178
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 43.2 bits (97), Expect = 1e-04
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGL--VIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQ 357
TRIVGG+ A GA P + V ICG S++ VTAAHC+ + A+
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSK-DAKD 160
Query: 358 FTLALG--TANIFSG-GTRVTTSNVQMHGSYNMDTLHN-DVAII 477
+T+A+G N G R + +H Y H+ DVA+I
Sbjct: 161 YTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALI 204
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 41.9 bits (94), Expect = 3e-04
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
TRIVGG+AA G P A L T CG SL+ +TA HC R QA
Sbjct: 9 TRIVGGTAAKHGDWPWQAQL---RTTSGFPYCGGSLIAPQWILTATHC--VERKQASSIV 63
Query: 364 LALGT-ANIFSGGTR--VTTSNVQMHGSYNM-DTLHNDVAII 477
+ LG + + GT + V H SY+ T +D+A++
Sbjct: 64 IRLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALL 105
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 41.9 bits (94), Expect = 3e-04
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+RIVGGS A GA P V+ + N CG +L+T +TAAHC + + Q
Sbjct: 629 SRIVGGSTAPPGAWPWQ---VMLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 364 LAL--GTANIFSGGTRVTTSNVQMHGSY-NMDTLHNDVAIINHNHVGFTNNIQRINLA 528
L T+ S R++ ++ H Y + ND+A++ + T RINLA
Sbjct: 686 LGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRP--TILTHRINLA 741
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +1
Query: 178 DGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQ 357
DG RIVGG A PH +++ + ICG SLL+ +TAAHC R +
Sbjct: 27 DGVRIVGGDEAV----PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSAD 81
Query: 358 FTLALGTANIFSGGTRVTTSNVQMHGSY--NMDTLHNDVAII 477
+T+ +G GT S H Y D H D+A+I
Sbjct: 82 YTVIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKH-DLALI 122
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC-WRTRRAQARQFT 363
RIVGG A AGA P LA + + + CG +L+ VTAAHC + +
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHCFYYDGKIVPSDIL 778
Query: 364 LALG--TANIFSGGTR-VTTSNVQMHGSYNMDTLHNDVAII 477
+ LG + G + V SN+ +H N + L DVA+I
Sbjct: 779 VRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALI 819
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 41.1 bits (92), Expect = 5e-04
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+R+V G A + P L + NGR ICG SL+ VTAAHC R +T
Sbjct: 30 SRVVNGDNAQQHSWPWQISLRV---NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYT 84
Query: 364 LALGTANIFSGGTRVTTS----NVQMHGSYNMDTLHNDVAIIN-HNHVGFTNNIQRINL 525
+ +G A+ +G T V + + H ++M L ND+A++ H V ++ + + L
Sbjct: 85 VVVG-AHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCL 142
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +1
Query: 190 IVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLA 369
I+GG+ A G P + + ++ ICG ++++ +TAAHC + RA L
Sbjct: 546 IMGGANAEHGEWPWQVSMKLN-SSSLPHICGGNVISPWWVLTAAHCVQDERAS--NIKLT 602
Query: 370 LGTANIFS-GGTR--VTTSNVQMHGSYNMDTLHNDVAIINHNH-VGFTNNIQRINL 525
+G +F+ GT + + H +Y+ +T+ D A++ + FT +Q + L
Sbjct: 603 MGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 658
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 40.7 bits (91), Expect = 7e-04
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHCWRTRRAQARQF 360
+R++ G A A A P L + G CG SL+ + +TAAHC R R++
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIR-NPRRY 94
Query: 361 TLALGTANIFSGGT----RVTTSNVQMHGSYNMDTLHNDVAII 477
++ +G A+ G T +++ S + H Y+ L +DVA+I
Sbjct: 95 SVYVG-AHELDGTTQVEEKISISKIYSHEKYSSSLLTSDVALI 136
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+RIVGG A + P +++ N T CG SL+ +T++HC+ T + QF
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFE 303
Query: 364 LALGTANI 387
+ LG ++
Sbjct: 304 IRLGEHDV 311
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 39.9 bits (89), Expect = 0.001
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
TRIVGG+ A GA P A L +N CG +L+ +TAAHC R F
Sbjct: 138 TRIVGGTKAPPGAWPWQAML---RSNYGGQFCGGTLVHPQWVITAAHC--VYRRGPNDFK 192
Query: 364 LALGTANIFSG--GTR--VTTSNVQMHGSYNMDTLH-NDVAII 477
+ +G A+ G GT + S V H SY+ T + +D+A+I
Sbjct: 193 IRMG-AHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALI 234
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
TRIVGG+AA G P A L T+G CG SL+ +TA HC +RR
Sbjct: 662 TRIVGGTAAKQGDWPWQAQL--RSTSG-FPFCGGSLIHPQWVLTATHCVSSRRPTDLNIR 718
Query: 364 LALGTANIFSGGTR-VTTSNVQMHGSYNMDT-LHNDVAII 477
L G + + + MH Y L +D+A+I
Sbjct: 719 LGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALI 758
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 247 IALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGT-ANIFSGGTRVT--TS 417
IAL + ICG SL++ T VTAAHC + + + G GT T
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVK 141
Query: 418 NVQMHGSYNMDTLHNDVAII 477
+ H +YN L ND+A+I
Sbjct: 142 RIITHPTYNSPQLSNDIALI 161
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 39.1 bits (87), Expect = 0.002
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSI--CGASLLTNTRSVTAAHCWRTRRAQAR 354
G RI+ G A PH I+L GR+ CG SL+++ VTAAHC R
Sbjct: 103 GARIINGQ----NAQPHSWPWQISL-RGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPG 156
Query: 355 QFTLALGTANIFSGGTRV----TTSNVQMHGSYNMDTLHNDVAII 477
+T+ +G A+ G T V S + H YN + ND+A++
Sbjct: 157 GYTVVVG-AHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALL 200
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 38.7 bits (86), Expect = 0.003
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRR--AQAR 354
GTRI+ GS A + P + + I NG CG +L++ VTAAHC +
Sbjct: 349 GTRIISGSDAQPNSWPWM--VQINYNNGHH--CGGTLVSPQWVVTAAHCVDHVKDPKNYN 404
Query: 355 QFTLALGT-ANIFSGGT--RVTTSNVQMHGSYNMDT-LHNDVAIINHNHVGFTNNIQRIN 522
+ + LG S GT R + + + +H Y T ++ND+A+I N N + +N
Sbjct: 405 ELAITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPARLN--KYVN 462
Query: 523 LA 528
LA
Sbjct: 463 LA 464
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
RIVGG A P AGL L + T +CG SL+ VTAAHC
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHC 476
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+RI+GG+ A P A ++I + CG +L+ VTAAHC + + +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC-VFQNIEPSNYK 341
Query: 364 LALGTANIFS--GGTRVTTSNVQMHGSYNMDTLHN-DVAII 477
+ LG + S G + + + MH + D + D+AI+
Sbjct: 342 IKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIM 382
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQ-ARQFT 363
R+VGG A AG P IAL R CG +L+ VT AHC+ ++ R +
Sbjct: 28 RVVGGDEAKAGQFPWQ----IALLFKRQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 364 LALGTANI 387
+ LG N+
Sbjct: 84 VTLGEYNL 91
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 36.7 bits (81), Expect = 0.012
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 330
RIVGG A GA P L L NG T CG SL+ VTA HC+
Sbjct: 53 RIVGGVEAAPGAWPWQVAL---LMNG-TQFCGGSLVNENWVVTARHCF 96
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.3 bits (80), Expect = 0.016
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 360
GTRIVGG+ A P A L A G + CG SL+ +TAAHC + +
Sbjct: 257 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCLENTQPSDIEI 313
Query: 361 TLALGTANIFSGGTRVTTSN 420
+L +F R+ +N
Sbjct: 314 SLITRAFILFIEVMRLLINN 333
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 36.3 bits (80), Expect = 0.016
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Frame = +1
Query: 118 NKIGIPXXXXXXXXXXXXDFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLT 297
N+ +P D +R+V G A G P A L + +G +CG SL+
Sbjct: 38 NEKSLPLVQTNAEHCGVSDSASSRVVSGDDATLGEWPWQAWLHVT-PHG--FVCGGSLIA 94
Query: 298 NTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRV-TTSNVQMHGSYNMDTLH-NDVA 471
+TA HC T + + L + G ++ + H Y+ D + NDVA
Sbjct: 95 PQWVLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVA 154
Query: 472 IINHNHVGFTNN 507
++ + F +
Sbjct: 155 LLQLSRPAFVTS 166
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 330
RIVGG + GA P A L + NG CG S++ + VTAAHC+
Sbjct: 26 RIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHCF 70
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 36.3 bits (80), Expect = 0.016
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 360
G RIV G A + + P +A L +N T CGA+L+ ++TAAHC + ++
Sbjct: 323 GARIVNGQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHC----VMRPDKY 376
Query: 361 TLALGTANIFS---GGTRVTTSNVQMHGSYNMDTLHNDVAII 477
T+ +G+ + + + V H ++M +D+A++
Sbjct: 377 TVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALL 418
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTN-GRTSICGASLLTNTRSVTAAHC 327
G R++ G A PH I+L GR CG +L+++ VTA+HC
Sbjct: 27 GARVINGQ----NAQPHSWPWQISLRPYGRYHSCGGTLISDRWVVTASHC 72
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.3 bits (80), Expect = 0.016
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 360
GTRIVGG+ A P A L A G + CG SL+ +TAAHC + +
Sbjct: 217 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCLENTQPSDIEI 273
Query: 361 TLALGTANIFSGGTRVTTSN 420
+L +F R+ +N
Sbjct: 274 SLITRAFILFIEVMRLLINN 293
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 35.9 bits (79), Expect = 0.021
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 360
G+RIVGG+ A P A +++ NG CG SL+ +TAAHC + +
Sbjct: 27 GSRIVGGTEAPINGWPWQA-MLLRSPNG-DQFCGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 361 TLALGTANIFSGGTRVTTSNVQMHGSYNMD-TLHNDVAIIN-HNHVGFTNNIQRINLA 528
+ + + + H +Y+ + ND+A++ N N + + LA
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLA 142
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.9 bits (79), Expect = 0.021
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 250 ALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQM 429
A NG ICG SLL++T +TAAHC R +T+ +G GT S
Sbjct: 332 ATLNGH-HICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYK 389
Query: 430 HGSY--NMDTLHNDVAII 477
H Y D H D+A+I
Sbjct: 390 HEKYVGGKDKKH-DLALI 406
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.9 bits (79), Expect = 0.021
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTL 366
+IVGG GA P + T G ICG S++ + VTAAHC T+ A ++T+
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGYK-TMGH--ICGGSIVNSQWIVTAAHCVTTKPPGASRYTM 1838
Query: 367 -ALGTANIFSG 396
A N+ G
Sbjct: 1839 YAFSDLNVTLG 1849
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNG-RTSICGASLLTNTRSVTAAHCW 330
RIVGG+ A G P G+ +G + ICG +L+ +TAAHC+
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCF 174
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTR 339
RIVGG A+ + P LV+ NG CG SL+ VT+ HC+ R
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCFDQR 296
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 241 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALG 375
+++ N T CG SL+ +T++HC+ T + QF + LG
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQAR 354
RI+GG + HP + +++ CG SL+ VTAAHC+ + R + R
Sbjct: 40 RIMGGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHCFDSNRLRWR 91
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 34.3 bits (75), Expect = 0.063
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
TRIVGG+AA A P A L A CG +L+ VTA+HC + + +
Sbjct: 22 TRIVGGTAAPKNAWPWQAQLRSA---SGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 364 LALGTANIFSGGTRVTTSNVQ---MHGSY-NMDTLHNDVAIINHNHVGFTNNIQRINLA 528
L SG + V V+ H Y N L ND+A+I N + +NLA
Sbjct: 79 LG-AHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLN--RAVNLA 134
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 34.3 bits (75), Expect = 0.063
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+ I+GG+ A G P L + +CG +LLT+ +TAA C+R + +A ++
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYG---PVCGGTLLTSEWVLTAARCFRDNK-RAGEWK 311
Query: 364 LALGTANIF 390
+ LG + +
Sbjct: 312 VILGETDFY 320
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
+RIVGG+ A GA P A ++ NG CG +L+ VTA+HC
Sbjct: 247 SRIVGGTTAQRGAWPWQA--MLRYYNG-NHFCGGTLVHPRWVVTASHC 291
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 33.5 bits (73), Expect = 0.11
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
TR++ GS A G P A L + T ICG SL+ +TAAHC + A +
Sbjct: 30 TRVISGSEALLGEWPWQAWLHLQHTG---FICGGSLVAPGWVLTAAHCILSDDASKYKVV 86
Query: 364 LA-LGTANIFSGGTRVTTSNVQMHGSY-NMDTLHNDVAII 477
L + I + + V H +Y N NDVA++
Sbjct: 87 LGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALL 126
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQA 351
RIVGG ++ G P L++ N R +C SL+ +TA HC++ R+ A
Sbjct: 53 RIVGGVVSSEGLWPWQVALLL---NDR-QVCAGSLIEARWIITAGHCFKDPRSSA 103
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
+R++GG AA + P ++++ G+ CG +L+++ +TAAHC
Sbjct: 475 SRVIGGEAARPYSWPWQ----VSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 241 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANI---FSGGTRVT 411
+ + L+ CG +L+ +TAAHC+ R + ++T+ +G +++ G ++
Sbjct: 1254 VALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLS 1312
Query: 412 TSNVQMHGSYNMDTLHNDVAII 477
+ +H YN + +D+A++
Sbjct: 1313 IKAIFVHPQYNSSSHEHDLAVL 1334
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 33.1 bits (72), Expect = 0.14
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 363
+R+V G+ A A P L TNG+ ICG SL+T +TAAHC +T
Sbjct: 36 SRVVNGANAPQHAWPWQISL---RTNGQ-HICGGSLITPEWVLTAAHC-VDHYPYPGAYT 90
Query: 364 LALGTANIFSGG 399
+ +G GG
Sbjct: 91 VVVGWGRTVGGG 102
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHC 327
G RI+ G A PH I+L GR +CG +L+++ VTA+HC
Sbjct: 843 GARIINGQ----NAQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 181 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 360
G R++GG A PH I+L +CG +L++ +TA HC + +
Sbjct: 433 GARVIGGE----DAAPHSWPWQISLRVRGKHMCGGTLISPDWVLTAGHCVH-GQLDPSGY 487
Query: 361 TLALGTAN 384
T+ +GT N
Sbjct: 488 TVVVGTLN 495
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
TRIVGG+AA + P A L T CG SL+ +TA HC
Sbjct: 52 TRIVGGTAAKQNSWPWQAQL---RTTSGFPYCGGSLIHPQWILTATHC 96
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
RIVGG GA+P + + G CG SL++ +TAAHC
Sbjct: 107 RIVGGHDTVKGAYPWH----VLIRKGGHVACGGSLISEKWVLTAAHC 149
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 184 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
+R+V G A + P L + NGR ICG SL+T +TAAHC
Sbjct: 79 SRVVNGDNAAQHSWPWQISLRV---NGR-HICGGSLITPEWVLTAAHC 122
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIAL--TNGRTSICGASLLTNTRSVTAAHC 327
RI GGS + G +P L +N T CG +L+ +TAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 99 GLFCHDHGRQRHQYCCEDLHGYY 31
G FCH H R CC+DL Y
Sbjct: 601 GSFCHIHPTDRFAVCCKDLLSSY 623
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2
Query: 134 PGPRVLDAPRKPL 172
P PRVLD+PRKPL
Sbjct: 385 PTPRVLDSPRKPL 397
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 187 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 327
R+V GS + P L+ + CG +L+ VTAAHC
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHC 89
>SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 243 KSSKMGVSTSVGGRTTHNPGTVEVSGFLGASKTLGPG 133
KSSK S+S TTH P V + T GPG
Sbjct: 61 KSSKSSKSSSTSSSTTHGPTPVPATPSSPPRPTPGPG 97
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 27.5 bits (58), Expect = 7.2
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Frame = +1
Query: 253 LTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSG------GTR--- 405
L R C L++ +TAAHC+ R + Q + LG SG G+R
Sbjct: 1106 LNRRRFPFCSGVLISARHVITAAHCF-DRIIRTDQIIVRLGAYIARSGRLDWGMGSRWEQ 1164
Query: 406 -VTTSNVQMHGSYNMDT-LHNDVAIINHNHVGFTNNIQRINL 525
+ + + H SY T ND+A++ N +R+N+
Sbjct: 1165 EIAVAAIHKHPSYQAPTRWANDIAVLKLARPAILN--KRVNV 1204
>SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 277 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 194
RW + + ++++DG H RW NHP
Sbjct: 77 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 103
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 277 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 194
RW + + ++++DG H RW NHP
Sbjct: 165 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 191
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 96 LFCHDHGRQRHQYCCE 49
+FC DHG ++ +Y CE
Sbjct: 283 IFCSDHGHEKLRYFCE 298
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 391 SGGTRVTTSNVQMHGSYNMDTLHNDVAIINHN 486
+GG R T + Q HG D LH + I+H+
Sbjct: 577 TGGDRDGTGDEQGHGGREEDFLHEEEEFIHHD 608
>SB_39522| Best HMM Match : PAN (HMM E-Value=0.0005)
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 280 RRWKFCHSSVRSQVQQDGGEHQRWRQNHPQSWY 182
R+W+ CH+S +Q + H +W++ H Y
Sbjct: 69 RKWEACHASGEYVMQVESMSH-KWKEFHASEKY 100
>SB_22098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 301 TRSVTAAHCWRTRRAQARQFTLALGTANIFSG 396
TR+ A HC R RA AR L + FSG
Sbjct: 785 TRNELALHCRRKTRAVARMSNLISALLDTFSG 816
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,628,137
Number of Sequences: 59808
Number of extensions: 268153
Number of successful extensions: 1210
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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