Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d22f
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 33 0.100
01_01_1111 - 8791925-8792649,8793506-8793890,8794341-8794618,879... 31 0.40
04_01_0446 - 5815231-5816202 31 0.70
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 31 0.70
03_05_0630 + 26260159-26260272,26260520-26260894 30 1.2
08_02_0595 + 19097299-19097462,19097490-19097910 29 1.6
04_04_1224 + 31858110-31858338,31859180-31859301,31859398-318595... 29 2.1
12_02_1262 + 27415191-27415279,27415367-27415565,27415635-274157... 29 2.8
12_02_1219 + 27096477-27096590,27096704-27097078 29 2.8
08_01_0531 - 4604556-4604582,4604829-4604921,4605381-4605572,460... 29 2.8
12_01_0525 - 4169605-4170417 28 3.7
12_01_0242 + 1812891-1812897,1814073-1814830 28 3.7
07_01_0975 + 8223269-8224354 28 3.7
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 28 3.7
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 28 3.7
12_02_0619 - 21276591-21276719,21276798-21276920,21277425-212775... 28 5.0
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 5.0
04_04_0766 - 27923120-27923554,27923843-27924580,27924815-279248... 28 5.0
04_03_0081 - 10829429-10829758 28 5.0
01_07_0101 + 41086735-41086809,41088634-41088721,41089727-410899... 28 5.0
10_08_0215 - 15939842-15940056,15940235-15940913 27 6.5
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 27 6.5
03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906 27 6.5
12_02_0803 + 23318429-23318552,23318688-23319877,23320724-233215... 27 8.7
12_02_0770 - 23007202-23007333,23007475-23007555,23007642-230077... 27 8.7
09_04_0242 + 15969091-15969128,15970172-15970409,15971439-159716... 27 8.7
08_01_0202 - 1638978-1639571 27 8.7
07_03_1050 - 23570785-23570824,23570938-23571004,23571114-235711... 27 8.7
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 8.7
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 27 8.7
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 33.5 bits (73), Expect = 0.100
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -3
Query: 350 DDDLDEGSAISAGDSHRGTFNNGRSNRDGLV-GVNKSRSDG-DGLVGVNKS-RSNRDGHV 180
+DD + G + D + T + +SN D L G NKS +D G G NKS +
Sbjct: 708 NDDNESGYKNTNTDEYGSTGSYNKSNTDDLTGGFNKSGTDDYSGGGGYNKSGADDYSSSG 767
Query: 179 GVNKS-RSNRDGFVGVNKSRSN 117
G +KS N G G NKS +N
Sbjct: 768 GYSKSGTDNYSGSGGYNKSGNN 789
Score = 33.1 bits (72), Expect = 0.13
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -3
Query: 347 DDLDEG--SAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGV 174
DD D G + S D + G+ + S D G N S +DG G G NKS S + G
Sbjct: 830 DDYDGGYKKSSSNDDGYGGSGYSKPSTGDYDSGKNASNTDGYGGSGYNKS-STDNSESGY 888
Query: 173 NKSRSNRDGF-VGVNKSRSN 117
NKS + G G NKS ++
Sbjct: 889 NKSGTGEYGSGGGYNKSSTD 908
Score = 28.7 bits (61), Expect = 2.8
Identities = 27/95 (28%), Positives = 36/95 (37%)
Frame = -3
Query: 395 NINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVG 216
N +G G+ G + D D G S D + G+ N S + G NKS + G G
Sbjct: 842 NDDGYGGS-GYSKPSTGDYDSGKNASNTDGYGGSGYNKSSTDNSESGYNKSGTGEYGSGG 900
Query: 215 VNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGD 111
S + G NKS + G G GD
Sbjct: 901 GYNKSSTDNYESGYNKSGTGDYGSGGGYDKSDAGD 935
>01_01_1111 -
8791925-8792649,8793506-8793890,8794341-8794618,
8794998-8795163
Length = 517
Score = 31.5 bits (68), Expect = 0.40
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 222 EPISVGPALVDTYE--PISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSE 371
EP P+++ T + P + VE APVTV DG I N+ PS+
Sbjct: 178 EPYDAPPSVISTEQLNPAAEPVVGVEAAPVTVAEPDGVTTSAITANIPSPSD 229
>04_01_0446 - 5815231-5816202
Length = 323
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -3
Query: 308 SHRGTFNNGRSNR-DGLVGVNKSRSDGDGLVGVNKSRSNRDG--HVGVNKSRSNRDGFVG 138
SH+ + R+ R G G + SDG G VG +SRS DG + G++G
Sbjct: 101 SHKRDIDGARAQRWSGGSGWGRCPSDGSGGVGWGRSRSGSDGWRRMWTEPESGGGGGWIG 160
Query: 137 VNKSR 123
R
Sbjct: 161 TEPKR 165
>02_01_0369 +
2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 234 VGPALVDTYEPISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAAD 383
VG + + E ++ GP EGA + VTGADG+ L +I +P E+ D
Sbjct: 142 VGVSEHGSLEHVNPGPGDGEGATIPVTGADGSGL---LIEGAQPVEMDVD 188
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -3
Query: 296 TFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG 177
TF++ +S RD + G+N DG + VN+++S R G G
Sbjct: 55 TFSSEQSMRDAIEGMNGKELDGRNIT-VNEAQSRRSGGGG 93
>08_02_0595 + 19097299-19097462,19097490-19097910
Length = 194
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 347 DDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGH 183
DD + S A D +G +G G+ GV GDG+ GV N+DG+
Sbjct: 93 DDAAQPSNKGAADGFQGDQGDGSQ---GVQGVGSQGIQGDGVQGVQGGGLNQDGN 144
>04_04_1224 +
31858110-31858338,31859180-31859301,31859398-31859507,
31859661-31859725,31859940-31860004,31860387-31860632,
31861212-31861313,31861484-31861534,31862015-31862105,
31862777-31862841
Length = 381
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 240 PALVDT-YEPISVGPAIVEGAPVTVTGADGTPLVQI 344
PA + T Y P+ VGPA + +P VTG +V +
Sbjct: 290 PARIGTPYHPMQVGPAYISPSPQPVTGGKFNHVVYV 325
>12_02_1262 +
27415191-27415279,27415367-27415565,27415635-27415775,
27415939-27416003,27416111-27416489,27416688-27417149,
27417226-27417546,27418184-27418501
Length = 657
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 314 GDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKS 204
GDS G N G +DG+ + S +D D VNKS
Sbjct: 239 GDSANGVENYGHKLKDGISSITSSETDND---DVNKS 272
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 296 TFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG 177
TF++ ++ RD + G+N DG + VN+++S R G G
Sbjct: 55 TFSSEQAMRDAIEGMNGKELDGRNIT-VNEAQSRRSGGGG 93
>08_01_0531 -
4604556-4604582,4604829-4604921,4605381-4605572,
4605800-4606390
Length = 300
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 41 ICDHHRRLRCRGHSRPCPWQ 100
+ H R L CRG +RP PW+
Sbjct: 57 VARHARALLCRGCARPTPWR 76
>12_01_0525 - 4169605-4170417
Length = 270
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = -3
Query: 368 GRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRD 189
G + V ++ + G GD G RSN + G G GV S ++
Sbjct: 32 GERILVGENRNGGGGYGGGDRRAGREGRTRSNTLAIAASFAKLEGGGGGDGVRVSNHSKP 91
Query: 188 GHVGVN 171
+GVN
Sbjct: 92 NAIGVN 97
>12_01_0242 + 1812891-1812897,1814073-1814830
Length = 254
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = -3
Query: 341 LDEGSAISAGDSHRGTFNNGRS-----NRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG 177
L + SA++ DS G +NN + NRD GVN++R ++ + N GH+
Sbjct: 179 LADSSALA--DSSWGNWNNSNNHHSSNNRDSFNGVNRNRYQDPN--SISGRKRNSGGHIQ 234
Query: 176 VNKS--RSNRDGFVG 138
S R+ +G+ G
Sbjct: 235 QRNSRQRNQTEGYQG 249
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 325 PSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPTEMG 146
PS + + A S GPT G +GP+ G+ GP+ G GP+ G
Sbjct: 264 PSGSPSGSPAGSPAGGPTAGGP----ASGPSSYGAASGPAEGPSSSGAASGPAEGPSPSG 319
Query: 145 S*VSTRAGPTEMGS 104
+ GP+ GS
Sbjct: 320 A-AGPAEGPSSYGS 332
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = -1
Query: 304 TGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPTEMGS*VSTRA 125
+G+PS+ + GS + AG G S GP+ G GP+ G+
Sbjct: 257 SGSPSSSPSGSPSGSPAGSPAGGPTAGGPAS---GPSSYGAASGPAEGPSSSGAASGPAE 313
Query: 124 GPTEMGSYLP 95
GP+ G+ P
Sbjct: 314 GPSPSGAAGP 323
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = -3
Query: 455 RKYGSGENNNFG--QRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNG 282
RK+G + N + GN N N +GN R + D S IS ++
Sbjct: 1672 RKHGFITDLNVATSEEALGNTKNWNPYAGNANRGSQRNHHRDRYSQISESWLLSSNYSRS 1731
Query: 281 RSNRDGLVGVNKSRSDGDGLVGVNKSRSN 195
RS+ G G ++S G G+ K N
Sbjct: 1732 RSDGFGTGGSSRSTPRGQTQRGICKFHEN 1760
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 317 AGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVG 138
AG S G +N +NR G +S+G G + +R N+ G V KS ++ G G
Sbjct: 1368 AGSSRPGEWNRKNNNRGQGGGREVWKSEGPHRGGSSSNR-NQGGGRAVWKSEASHRG-SG 1425
Query: 137 VNKSRSNG 114
N++R G
Sbjct: 1426 NNRNRGGG 1433
>12_02_0619 -
21276591-21276719,21276798-21276920,21277425-21277535,
21277887-21277901,21279117-21279188
Length = 149
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 246 LVDTYEPISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAADPVDVEDIA 407
+V T + G A+ + + GAD V+I++ + I D +DIA
Sbjct: 78 IVKTQLALPEGTAVTGESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQDIA 131
>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3
Query: 344 DLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSD 234
D ++G+ +GD++ T+ +GR NRD N +R+D
Sbjct: 1401 DRNQGNNYGSGDNNDRTWGSGRGNRDQDGCKNWNRND 1437
>04_04_0766 -
27923120-27923554,27923843-27924580,27924815-27924874,
27925281-27925328
Length = 426
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/91 (26%), Positives = 35/91 (38%)
Frame = +3
Query: 138 TYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVEGAPVTVTG 317
T +PIS PALVD + S G A + +E + G A VE TV G
Sbjct: 33 TTDPISEDPALVDR-IAASFWDTPPRAAFSSEAGDADIVVFEDLDHGNAAVEATTTTVPG 91
Query: 318 ADGTPLVQIIINVNRPSEIAADPVDVEDIAE 410
+ S+ + + ++DI E
Sbjct: 92 EPHAVAGGEVAECEPNSDNDLEQITMDDIGE 122
>04_03_0081 - 10829429-10829758
Length = 109
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -3
Query: 401 VLNINGISGNLGRTVH-VDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDG 225
+ ++ GI + R V D + S S D +G +G G+ GV GDG
Sbjct: 30 IADVPGIGSSKDREVQQAPDGAAQPSDKSVADGSQGVQGDGSQ---GVQGVGSHGIQGDG 86
Query: 224 LVGVNKSRSNRDGHV 180
G N+DG++
Sbjct: 87 SQGFQGGNLNQDGNM 101
>01_07_0101 +
41086735-41086809,41088634-41088721,41089727-41089923,
41090077-41090266,41090469-41090860,41091390-41091965
Length = 505
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -3
Query: 380 SGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD-GLVGVNKSRSDGDGLVGVNKS 204
SG G HV + L EG A G + +G ++R VG +KSRS G GL
Sbjct: 12 SGGGGGACHVSNVL-EGEAKKPGADSKDARKDGSADRGVSRVGSDKSRSHG-GLDSKKDV 69
Query: 203 RSNRDGH 183
RDG+
Sbjct: 70 VIQRDGN 76
>10_08_0215 - 15939842-15940056,15940235-15940913
Length = 297
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -3
Query: 452 KYGSGENNNFG-QRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRS 276
+YGSG +G FG+ G G + +G AGDS RG + G
Sbjct: 225 RYGSGGGGGYGGPNRFGHGFGSGVGIGEAGNQYGDEYAKSKGDGGGAGDSARGGYGEGLG 284
Query: 275 NRDG 264
+ G
Sbjct: 285 HGSG 288
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -3
Query: 323 ISAGDSHRGTFNNGR-SNRDGLVGVNKSRSDGDG----LVGVNKSRSNRDGH 183
++ D RG R + RD +V + + DGDG LVGV ++ R GH
Sbjct: 188 VNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGH 239
>03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906
Length = 190
Score = 27.5 bits (58), Expect = 6.5
Identities = 26/93 (27%), Positives = 35/93 (37%)
Frame = -3
Query: 386 GISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 207
G S +G V ++ D+D+ D R T N G S G + D D + N
Sbjct: 90 GHSPGIGHHVAINGDVDD-------DDVRPT-NPGHSPGIGHHAIVNGADDADDVRPTNP 141
Query: 206 SRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 108
S GH VN + + D N S G G
Sbjct: 142 GHSPGIGHAVVNSADDDADDVRPTNPGHSPGIG 174
>12_02_0803 + 23318429-23318552,23318688-23319877,23320724-23321528,
23321938-23322417,23322535-23322815,23323207-23323302,
23323423-23323548,23324100-23325890
Length = 1630
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 135 DTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPI 269
+T P S PAL+++ + + GP+L+ E I LVD E +
Sbjct: 1465 ETIGPTSANPALINSVLEVCYGPSLLP--ETIGEVKYLVDFVESV 1507
>12_02_0770 -
23007202-23007333,23007475-23007555,23007642-23007742,
23007855-23008455,23008742-23009365,23010294-23010377
Length = 540
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 257 GVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSR 123
G N+ S+G G G SR GH G S NR+ G +K+R
Sbjct: 148 GSNQLHSEGSGGGGGGSSRKGESGH-GAVVSAGNRESSTG-DKTR 190
>09_04_0242 +
15969091-15969128,15970172-15970409,15971439-15971668,
15972235-15972469,15973133-15973224,15973333-15973336
Length = 278
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -3
Query: 314 GDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGV 135
G ++ G+F +N LVG K + ++ VN S G G R VG
Sbjct: 157 GSTNLGSFFGSVTNEAALVGKLKDTPPEEHMMTVNADYSGAGGSSGAPVFRGENGKVVGT 216
Query: 134 N 132
N
Sbjct: 217 N 217
>08_01_0202 - 1638978-1639571
Length = 197
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -3
Query: 407 GNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGD 228
G+V+ + SGN GRT VD G A++ G G + G G R G
Sbjct: 49 GDVVEFSVGSGNDGRTKAVDVTAPGGGALTGGSRPSGGGDRGYGGGGGGGRYGGDRGYGG 108
Query: 227 G 225
G
Sbjct: 109 G 109
>07_03_1050 -
23570785-23570824,23570938-23571004,23571114-23571196,
23572028-23572201,23572268-23572471,23572570-23573300
Length = 432
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 410 FGNVLNINGISGNLGRTVHVDDDLDEGSAISAGD 309
FG V N + I N+ + H DDLDE SA D
Sbjct: 389 FG-VTNEHYIGNNMKKKSHRSDDLDEASAYEDSD 421
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -3
Query: 296 TFNNGRSNR---DGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVN 171
T + GRS+R GL G+ + RSD + G+ S + GHV +N
Sbjct: 486 TGDQGRSDRLHAAGLTGIPE-RSDRPCVAGLTGSGQSAGGHVSIN 529
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 183 VPISVGPALVDTYEPISVGPALVDTYEPIS--VGPA 284
+P + P L+D EP+S P L D + + +GPA
Sbjct: 831 IPSAPPPDLLDLGEPVSSSPPLADPFTQLEGLLGPA 866
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,658,697
Number of Sequences: 37544
Number of extensions: 257865
Number of successful extensions: 1069
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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