Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d22f
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 45 3e-05
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 33 0.16
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 33 0.16
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 31 0.48
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 30 0.84
Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical pr... 30 1.1
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 29 1.5
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical ... 29 1.5
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 1.9
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 1.9
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 1.9
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 1.9
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 1.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 1.9
AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei) ig-d... 29 2.6
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 28 3.4
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 28 3.4
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 28 3.4
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 3.4
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 28 3.4
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 28 3.4
Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 27 5.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 5.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 5.9
U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical pr... 27 5.9
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 27 5.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 27 5.9
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 27 7.8
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -1
Query: 334 RGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPT 155
+ P+ P T+ P+T PT M S +T PT M S +T PT M + +T PT
Sbjct: 169 KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 228
Query: 154 EMGS*VSTRAGPTEMGS 104
M S +T PT M S
Sbjct: 229 TMKSTPTTPTTPTTMKS 245
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -1
Query: 334 RGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPT 155
+ P+ P T+ P+T PT M S +T PT M S +T PT M + +T PT
Sbjct: 283 KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 342
Query: 154 EMGS*VSTRAGPTEMGS 104
M S +T PT M S
Sbjct: 343 TMKSTPTTPTTPTTMKS 359
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -1
Query: 337 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 158
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 181 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 240
Query: 157 TEMGS*VSTRAGPTEMGS 104
T M S +T PT M S
Sbjct: 241 TTMKSTPTTPTTPTTMKS 258
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -1
Query: 337 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 158
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 194 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 253
Query: 157 TEMGS*VSTRAGPTEMGS 104
T M S +T PT M S
Sbjct: 254 TTMKSTPTTPTTPTTMKS 271
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -1
Query: 337 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 158
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 207 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 266
Query: 157 TEMGS*VSTRAGPTEMGS 104
T M S +T PT M S
Sbjct: 267 TTMKSTPTTPTTPTTMKS 284
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -1
Query: 337 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 158
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 295 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354
Query: 157 TEMGS*VSTRAGPTEMGS 104
T M S +T PT M S
Sbjct: 355 TTMKSTPTTPTTPTTMKS 372
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -1
Query: 337 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 158
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 308 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 367
Query: 157 TEMGS*VSTRAGPTEMGS 104
T M S +T PT M S
Sbjct: 368 TTMKSTPTTPTTPTTMKS 385
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -1
Query: 337 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 158
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 321 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 380
Query: 157 TEMGS*VSTRAGPTEMGS 104
T M S +T PT M S
Sbjct: 381 TTMKSTPTTPTTPTTMKS 398
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 334 RGVPSAPVTVTGAPSTMAGPTEMGS*VST----RAGPTEMGS*VSTRAGPTEMGT 182
+ P+ P T+ P+T PT M S +T ++ PT + S+ PT M T
Sbjct: 397 KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMKT 451
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = -1
Query: 310 TVTGAPSTMAGP-TEMGS*VSTRAGPTEMGS*VSTRAGP-TEMGT*VSTRAGP-TEMGS* 140
+ T PST +GP T S VST +GP+ S ST +GP T G+ ST +GP T G
Sbjct: 552 STTSGPSTSSGPSTASRSTVSTTSGPSTT-SGPSTTSGPSTTSGSTKSTTSGPSTTSGKN 610
Query: 139 VSTRAG 122
+ST +G
Sbjct: 611 ISTVSG 616
Score = 34.3 bits (75), Expect = 0.052
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -1
Query: 313 VTVTGAPSTMAGPTEMG-S*VSTRAGP-TEMGS*VSTRAGPTEMGT*VSTRAGP-TEMGS 143
V+ T ST +G T+ S ST +GP T S VST +GP+ ST +GP T GS
Sbjct: 537 VSTTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSG-PSTTSGPSTTSGS 595
Query: 142 *VSTRAGPT 116
ST +GP+
Sbjct: 596 TKSTTSGPS 604
Score = 30.3 bits (65), Expect = 0.84
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 313 VTVTGAPSTMAGPTEMGS*VSTRAGP-TEMGS*VSTRAGP-TEMGT*VSTRAG 161
V+ T PST +GP ST +GP T GS ST +GP T G +ST +G
Sbjct: 571 VSTTSGPSTTSGP-------STTSGPSTTSGSTKSTTSGPSTTSGKNISTVSG 616
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 33.1 bits (72), Expect = 0.12
Identities = 29/108 (26%), Positives = 43/108 (39%)
Frame = -3
Query: 479 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHR 300
+G RN D Y NN N NG G G + ++ +E + +++R
Sbjct: 181 YGNRN-DGDDYNGNGNNQDNWNSGSNSGGYNGGGGGSGGGSNWNNGDNENDGWNNNNNNR 239
Query: 299 GTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSN 156
+ NN +N G N +DG+ G S N D G + S SN
Sbjct: 240 KSNNNNNNNYGNSWGTND--NDGNSWKGSGNSNGNSDNWGGSSGSGSN 285
Score = 29.9 bits (64), Expect = 1.1
Identities = 38/132 (28%), Positives = 56/132 (42%)
Frame = -3
Query: 503 GEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSA 324
G + G+ G N YGS +NN+G G+ NG SG G T D+D + GS
Sbjct: 313 GGNEGGDQWGSNNNGGDNYGSELSNNWGGSNGGS--GSNGGSGG-GNT---DND-NWGS- 364
Query: 323 ISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGF 144
+ G+S N G G G N +D G N+D +++G+
Sbjct: 365 -NNGNSGGSWGNGGTGGSGGSGGGNWGDNDNYGSSNKWNGNGNQDNDNDNFGGGYSKNGY 423
Query: 143 VGVNKSRSNGDG 108
G N +R++G G
Sbjct: 424 -GSNNNRNDGWG 434
Score = 28.7 bits (61), Expect = 2.6
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Frame = -3
Query: 497 DRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS 318
D G +G + G+G + G +G+ N G S + D+D D
Sbjct: 360 DNWGSNNGNSGGSWGNGGTGGSGGSGGGNWGDNDNY-GSSNKWNGNGNQDNDNDN---FG 415
Query: 317 AGDSHRGT-FNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFV 141
G S G NN R++ G N + ++ + G SN G G N + + DG
Sbjct: 416 GGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGNDGNN 475
Query: 140 GVNKSRSNGDG 108
+ + NG G
Sbjct: 476 WESNNGGNGGG 486
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 33.1 bits (72), Expect = 0.12
Identities = 29/108 (26%), Positives = 43/108 (39%)
Frame = -3
Query: 479 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHR 300
+G RN D Y NN N NG G G + ++ +E + +++R
Sbjct: 181 YGNRN-DGDDYNGNGNNQDNWNSGSNSGGYNGGGGGSGGGSNWNNGDNENDGWNNNNNNR 239
Query: 299 GTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSN 156
+ NN +N G N +DG+ G S N D G + S SN
Sbjct: 240 KSNNNNNNNYGNSWGTND--NDGNSWKGSGNSNGNSDNWGGSSGSGSN 285
Score = 29.9 bits (64), Expect = 1.1
Identities = 38/132 (28%), Positives = 56/132 (42%)
Frame = -3
Query: 503 GEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSA 324
G + G+ G N YGS +NN+G G+ NG SG G T D+D + GS
Sbjct: 313 GGNEGGDQWGSNNNGGDNYGSELSNNWGGSNGGS--GSNGGSGG-GNT---DND-NWGS- 364
Query: 323 ISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGF 144
+ G+S N G G G N +D G N+D +++G+
Sbjct: 365 -NNGNSGGSWGNGGTGGSGGSGGGNWGDNDNYGSSNKWNGNGNQDNDNDNFGGGYSKNGY 423
Query: 143 VGVNKSRSNGDG 108
G N +R++G G
Sbjct: 424 -GSNNNRNDGWG 434
Score = 28.7 bits (61), Expect = 2.6
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Frame = -3
Query: 497 DRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS 318
D G +G + G+G + G +G+ N G S + D+D D
Sbjct: 360 DNWGSNNGNSGGSWGNGGTGGSGGSGGGNWGDNDNY-GSSNKWNGNGNQDNDNDN---FG 415
Query: 317 AGDSHRGT-FNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFV 141
G S G NN R++ G N + ++ + G SN G G N + + DG
Sbjct: 416 GGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGNDGNN 475
Query: 140 GVNKSRSNGDG 108
+ + NG G
Sbjct: 476 WESNNGGNGGG 486
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 32.7 bits (71), Expect = 0.16
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 1/131 (0%)
Frame = -3
Query: 497 DRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS 318
D G G N G G + N G N G GN T + D ++ S
Sbjct: 566 DGNGTGDGDNNESGNGNGDGSDKNSGAGAGTKPENREGGDGNGNGTGDGNGDGNDNGNGS 625
Query: 317 AGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVG 138
G G N+ G G + + DG G N S + ++G NKS + G G
Sbjct: 626 KGLGTGSGDGKGEGNKSGTPGKSDGKEDG---AGSNGSGNGKEG--DGNKSGGSGKGGAG 680
Query: 137 VNKS-RSNGDG 108
KS +GDG
Sbjct: 681 NGKSGDGSGDG 691
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Frame = -3
Query: 446 GSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS-AGDSHRGTFNNGRSNR 270
G G +N G + G GN T D ++G+ + +G+ G N +
Sbjct: 616 GDGNDNGNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDGAGSNGSGNGKEGDGNKSGGSG 675
Query: 269 DGLVGVNKS-------RSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGD 111
G G KS +++G+G G K ++ + G N R G + G+
Sbjct: 676 KGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGNGKGN 735
Query: 110 G 108
G
Sbjct: 736 G 736
Score = 28.7 bits (61), Expect = 2.6
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Frame = -3
Query: 377 GNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD-GLVGVNKSRSDGDGLVGVNKSR 201
GN+ +H DD D G + +G NG + D G DGDG N +
Sbjct: 503 GNIKINIHSPDDNDLLEKDENGPNGKGGAGNGNGDGDKDNNGKGNGTGDGDGDGNGNGNG 562
Query: 200 SNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 108
DG+ G +N G NGDG
Sbjct: 563 LTGDGN-GTGDGDNNESG-------NGNGDG 585
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 32.7 bits (71), Expect = 0.16
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 1/131 (0%)
Frame = -3
Query: 497 DRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS 318
D G G N G G + N G N G GN T + D ++ S
Sbjct: 566 DGNGTGDGDNNESGNGNGDGSDKNSGAGAGTKPENREGGDGNGNGTGDGNGDGNDNGNGS 625
Query: 317 AGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVG 138
G G N+ G G + + DG G N S + ++G NKS + G G
Sbjct: 626 KGLGTGSGDGKGEGNKSGTPGKSDGKEDG---AGSNGSGNGKEG--DGNKSGGSGKGGAG 680
Query: 137 VNKS-RSNGDG 108
KS +GDG
Sbjct: 681 NGKSGDGSGDG 691
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Frame = -3
Query: 446 GSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS-AGDSHRGTFNNGRSNR 270
G G +N G + G GN T D ++G+ + +G+ G N +
Sbjct: 616 GDGNDNGNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDGAGSNGSGNGKEGDGNKSGGSG 675
Query: 269 DGLVGVNKS-------RSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGD 111
G G KS +++G+G G K ++ + G N R G + G+
Sbjct: 676 KGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGNGKGN 735
Query: 110 G 108
G
Sbjct: 736 G 736
Score = 28.7 bits (61), Expect = 2.6
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Frame = -3
Query: 377 GNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD-GLVGVNKSRSDGDGLVGVNKSR 201
GN+ +H DD D G + +G NG + D G DGDG N +
Sbjct: 503 GNIKINIHSPDDNDLLEKDENGPNGKGGAGNGNGDGDKDNNGKGNGTGDGDGDGNGNGNG 562
Query: 200 SNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 108
DG+ G +N G NGDG
Sbjct: 563 LTGDGN-GTGDGDNNESG-------NGNGDG 585
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 31.1 bits (67), Expect = 0.48
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 180 YVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVEGAPVTVTGADGTP-LVQIIINV 356
Y PIS+ D + P L+DT++P+ P I PVTV+ P L+
Sbjct: 435 YPPISLNTRY-DYDSDRDILPLLLDTFQPLPAPPQI---PPVTVSVPVSVPELLTSTKKP 490
Query: 357 NRPSEIAADPVDVEDIAEEPL 419
++P+++ A P+ ++++ L
Sbjct: 491 SQPAKVPAAPIKAPRLSDQEL 511
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 123 PALVDTYEPISVGPAL--VDTYVPISVGPALVDTYEP 227
P L+DT++P+ P + V VP+SV L T +P
Sbjct: 454 PLLLDTFQPLPAPPQIPPVTVSVPVSVPELLTSTKKP 490
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 366 SEIAADPVDVEDIAEEPLPEVVILPTP 446
S AA P DV D A E P+V++ PTP
Sbjct: 556 SAAAAAPEDVPDAAPEDPPKVILKPTP 582
>Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical
protein H12D21.6 protein.
Length = 163
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -3
Query: 476 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 297
GF N + + G G NN Q FG + +G SG+ G + GS+ +G S G
Sbjct: 92 GFGNQESQSSGMGSNNQ-RQSGFGGQMGSSGSSGSSGSSSQSGFGGQMGSSGQSGSSSNG 150
Query: 296 TFNN 285
N+
Sbjct: 151 MGNS 154
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Frame = +3
Query: 171 VDTYVPISVGPALVDTY---EPISVGPALVDTYE---PISVGPA-IVEGAPVTV------ 311
+ TYVP VG L+D + EPI+ P Y+ + V PA V G P T
Sbjct: 1385 IATYVPKCVGNHLIDIFLQGEPIAGSPFTAKAYDARKTVLVPPANAVVGKPATFVIDAAR 1444
Query: 312 TGADGTPLVQIIINVNRPSEIAAD 383
+GA ++ + N N P+ + A+
Sbjct: 1445 SGAGNMEIIVSVDNRNVPNFVQAE 1468
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Frame = +3
Query: 171 VDTYVPISVGPALVDTY---EPISVGPALVDTYE---PISVGPA-IVEGAPVTV------ 311
+ TYVP VG L+D + EPI+ P Y+ + V PA V G P T
Sbjct: 1385 IATYVPKCVGNHLIDIFLQGEPIAGSPFTAKAYDARKTVLVPPANAVVGKPATFVIDAAR 1444
Query: 312 TGADGTPLVQIIINVNRPSEIAAD 383
+GA ++ + N N P+ + A+
Sbjct: 1445 SGAGNMEIIVSVDNRNVPNFVQAE 1468
>AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical
protein C49A9.6 protein.
Length = 360
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 455 RKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVD 348
RKYGS N FG+ L G+ N + + G+ VH++
Sbjct: 308 RKYGSAFNKYFGEILEGDSENTKLSTDHNGKMVHIE 343
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 476 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 297
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 302 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 361
Query: 296 TFNNGRSNRDGLVG 255
TFN+G GL G
Sbjct: 362 TFNDGAPGPPGLPG 375
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 476 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 297
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 301 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 360
Query: 296 TFNNGRSNRDGLVG 255
TFN+G GL G
Sbjct: 361 TFNDGAPGPPGLPG 374
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 476 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 297
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 301 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 360
Query: 296 TFNNGRSNRDGLVG 255
TFN+G GL G
Sbjct: 361 TFNDGAPGPPGLPG 374
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 476 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 297
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 302 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 361
Query: 296 TFNNGRSNRDGLVG 255
TFN+G GL G
Sbjct: 362 TFNDGAPGPPGLPG 375
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 476 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 297
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 338 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 397
Query: 296 TFNNGRSNRDGLVG 255
TFN+G GL G
Sbjct: 398 TFNDGAPGPPGLPG 411
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 1.9
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = -3
Query: 305 HRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSN----RDGHVGVNKSRSNRDGFVG 138
HRG + G G + R G G G + SRS R GH G R R G G
Sbjct: 280 HRGGRHGGHGRHGSCSGSPRGRH-GHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHG 338
Query: 137 VNKSRSNGDG 108
+ SRS G
Sbjct: 339 RHGSRSGSPG 348
>AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei)
ig-domain protein protein7 protein.
Length = 239
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 413 LFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGR 279
L+ N+ N+ + NLG H+D + E + +S G +GT N G+
Sbjct: 46 LYANIQNLWCGAQNLGE--HIDVEYGEFTRLSDGKVFKGTVNQGK 88
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 371 LGRTVHVDDDLDEGSAISAGDSHRGTFNN 285
+ RT++V+DD G S GDS +GT N+
Sbjct: 698 IDRTLYVEDD---GDGTSLGDSKKGTLNS 723
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 380 SGNLGRTVHVDDDLDEGSAI--SAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 207
+G T+ VDDD + + RGT NN R + V + KS D D +
Sbjct: 134 TGEFKTTITVDDDHQPTAVMRPKKESDTRGTLNNNRYSFQSCVQLRKSCPDLD-----ST 188
Query: 206 SRSNRDGHVGVNKSRSNR 153
+ SN + H V+K R+ R
Sbjct: 189 AMSNMEQH-RVSKKRTRR 205
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 380 SGNLGRTVHVDDDLDEGSAI--SAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 207
+G T+ VDDD + + RGT NN R + V + KS D D +
Sbjct: 313 TGEFKTTITVDDDHQPTAVMRPKKESDTRGTLNNNRYSFQSCVQLRKSCPDLD-----ST 367
Query: 206 SRSNRDGHVGVNKSRSNR 153
+ SN + H V+K R+ R
Sbjct: 368 AMSNMEQH-RVSKKRTRR 384
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -3
Query: 380 SGNLGRTVHVDDDLDEGSAI--SAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 207
+G T+ VDDD + + RGT NN R + V + KS D D +
Sbjct: 281 TGEFKTTITVDDDHQPTAVMRPKKESDTRGTLNNNRYSFQSCVQLRKSCPDLD-----ST 335
Query: 206 SRSNRDGHVGVNKSRSNR 153
+ SN + H V+K R+ R
Sbjct: 336 AMSNMEQH-RVSKKRTRR 352
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -3
Query: 332 GSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNR 153
GS S + + NN S+ + G N S S N + N +G+ N N
Sbjct: 197 GSVGSGSGNSGNSSNNNNSSGNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNG 256
Query: 152 DGFVGVNKSRSNGDG 108
+ G N + SNG+G
Sbjct: 257 NSN-GNNGNGSNGNG 270
Score = 27.5 bits (58), Expect = 5.9
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 506 FGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGS 327
+G + +G +G N G+G NN G GN N NG +GN G + + + G+
Sbjct: 221 YGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNG-NSNGNNGN-GSNGNGNGNNGNGN 278
Query: 326 AISAGDSH 303
+ G+ H
Sbjct: 279 NGNNGNGH 286
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 371 LGRTVHVDDDLDEGSAISAGDSHRGTFNN 285
+ RT++V+DD G S GDS +GT N+
Sbjct: 698 IDRTLYVEDD---GDGTSLGDSKKGTLNS 723
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 419 QRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD 267
+ LFG++ I+G+ GN ++ ++D DE I D + N D
Sbjct: 63 KELFGDISEISGLQGNFDKS-ESEEDEDEEEKIDNFDESEPEIEDEEENED 112
>Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical
protein F28C6.5 protein.
Length = 219
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 348 INVNRPSEIAADPVDVEDIAEEPL-PEVVILPTPVFPE 458
++V P ++ A P+D E + EPL P +ILP+ + E
Sbjct: 81 LHVPEPQDVVAVPLDEEALHGEPLFPPELILPSELAAE 118
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.5 bits (58), Expect = 5.9
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Frame = -3
Query: 470 RNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVH--------VDDDLDEGSAIS- 318
+N+ + S + + + + G V+N+NG++GN G T + + G +IS
Sbjct: 533 QNIQHQMQQSRQPSGYHPAVNG-VVNLNGVNGNNGNTEYNVQPYQGTGNQQTQNGQSISP 591
Query: 317 -----AGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKS 165
A S N+G +N+ V S ++ + + G S R G N +
Sbjct: 592 EMRRQAPYSFNSNINSGYTNQQPGVSSGNSNTNSNNMNGFGAQPSYRTSQFGFNNN 647
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 355 TLMMIWTRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VST 209
T ++ T P+ PVT T PS+ PT + V+ A T V+T
Sbjct: 568 TTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTT 616
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 355 TLMMIWTRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VST 209
T ++ T P+ PVT T PS+ PT + V+ A T V+T
Sbjct: 624 TTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTT 672
>U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical
protein M02D8.7 protein.
Length = 385
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 162 PALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVE--GAPVTVTGA---DG 326
P LV P++ PA ++ + VDTYE + P I + G P+++TG G
Sbjct: 62 PDLVIYEGPMNKRPAHNMQFQMREIKAEPVDTYETTTPAPTIQQPPGFPMSITGGIPQMG 121
Query: 327 TPLVQ 341
PL+Q
Sbjct: 122 PPLLQ 126
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 27.5 bits (58), Expect = 5.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 264 PISVGPAIVEGAPVTV-TGADGTPLVQIIINVNRPSEIAADPVDVEDIAEEPLPEVVILP 440
P V P + PVT AD P V + SE +PVDV+ P+V + P
Sbjct: 555 PARVPPQVPSQVPVTGGVAADEPPPPCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPVTP 614
Query: 441 T 443
T
Sbjct: 615 T 615
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.5 bits (58), Expect = 5.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 264 PISVGPAIVEGAPVTV-TGADGTPLVQIIINVNRPSEIAADPVDVEDIAEEPLPEVVILP 440
P V P + PVT AD P V + SE +PVDV+ P+V + P
Sbjct: 555 PARVPPQVPSQVPVTGGVAADEPPPPCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPVTP 614
Query: 441 T 443
T
Sbjct: 615 T 615
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.1 bits (57), Expect = 7.8
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -3
Query: 281 RSN-RDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNK--SRSNRDGFVGVNKSRSNGD 111
RSN R G ++SRS RS RDG VG N+ RS RD +S D
Sbjct: 239 RSNDRHGRDRRSRSRSQSRDRNRRRDDRSGRDGRVGRNERDDRSGRDERRDDRRSAPTKD 298
Query: 110 GL 105
G+
Sbjct: 299 GI 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,435,749
Number of Sequences: 27780
Number of extensions: 209439
Number of successful extensions: 890
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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