Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d17r
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58864| Best HMM Match : VWC (HMM E-Value=0.0031) 31 1.2
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.8
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.8
SB_27859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 29 5.0
SB_34064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 29 5.0
SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_28768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 28 6.6
SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2) 28 8.7
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_9094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_58864| Best HMM Match : VWC (HMM E-Value=0.0031)
Length = 166
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 411 AQCHHCGCDLDTAEHALVVCPAWEG 485
++C+HC CD D A LV C EG
Sbjct: 77 SKCYHCACDRDVARCDLVNCYCPEG 101
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 498 GHGATPPMRGRRRAHAPPCPSRNHNGG 418
GH P +RGRR PP P NGG
Sbjct: 268 GHPGPPGVRGRRGKRGPPGPPGPPNGG 294
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/71 (25%), Positives = 23/71 (32%)
Frame = -2
Query: 634 PRSTAVGFYVSHAPHRLLXRDGALAKVEHCLP*LIVAYSFPIFAKRSRRHPSHAGQTTSA 455
P S++ +V+H PH G L P + I H H T
Sbjct: 471 PSSSSSPLFVNHHPHHHHHPTGQLLLTSSSSPHWSIITHIIIITTLVNHHSYHHHHPTGQ 530
Query: 454 CSAVSKSQPQW 422
S S S P W
Sbjct: 531 SSPTSSSSPHW 541
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 75 GGFRCVCSSCHR*GGACCRQNQEIGPRRG 161
GG+RC C +R G C E RRG
Sbjct: 331 GGYRCTCPDGYRGDGRTCTDINECQERRG 359
>SB_27859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.1 bits (62), Expect = 3.8
Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Frame = -2
Query: 310 PNPQGPGESPRR----C----YDQLKDRPAAWTMTPYGHR*VALSGGCGTTLPRIY*APR 155
PN QGP + R C + Q + R T TP + + T R Y R
Sbjct: 23 PNFQGPSRAHRTPQEICTGGRFTQARARGCVTTPTPSYSSELRICFDGTTGRMRPYDRQR 82
Query: 154 RGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
RG I R H P R Q +T R+PP T
Sbjct: 83 RGCI---VRNHRPRDRQQSRRTARSPPHPTT 110
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 500 LRKNRK*IGDDESWKAMLDFCECTISXKEAVGRVRDVKAHRRRAW 634
+RK + DDE++K ++D CE A R R K+ R R W
Sbjct: 22 VRKQQLRAVDDETYKTLVDLCEVKFKVPVA-ERSRAQKSARVRVW 65
>SB_34064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGC-GTTLPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 359 VRLLGPCFKTDRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 406
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -3
Query: 501 RGHGATPPMRGRRRAHAPPCPSRNHNGGTVLSARSDPMQELTKAIMPSEHL 349
R H + RR A +PP P+ + GT+ + I PS +L
Sbjct: 17 RNHRPRDRQQSRRTARSPPHPTTDREDGTLAERHAPQAPRSVLFIFPSRYL 67
>SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_28768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 159 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 206
>SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 278 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 325
>SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDRQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 710 PRPTCEGXPKQLEGGPGLGRDPPP 639
P P+ G P+ GP GR PPP
Sbjct: 707 PSPSPPGPPRNAPYGPPRGRSPPP 730
>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
Length = 1388
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 364 HDCFGEFLHRIGASR*HSATIVVATWTRRSMRSSSAPHGRGGAVTSS 504
H + HR R S+TI AT + +RSS+AP G A+ +S
Sbjct: 1071 HTPIAQRRHRFSPQRQRSSTIS-ATHRKEELRSSTAPPPGGNALENS 1116
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 214 NDAHMESWSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGHD 369
+D+ +S A V R+ + P +VD V R F P Q++TG +
Sbjct: 850 DDSFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKE 901
>SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDHQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 211 VALSGGCGTT-LPRIY*APRRGPIS*FCRQHAPPQRWQDEQTQRNPPPRAT 62
V L G C T R Y RRG I R H P R Q +T R+PP T
Sbjct: 35 VRLLGPCFKTGRMRPYDHQRRGCI---VRNHRPRDRQQSRRTARSPPHSTT 82
>SB_9094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 390 MQELTKAIMPSEHLRRPESEAY 325
+QEL K+ PS+H RR E +AY
Sbjct: 456 IQELLKSSRPSKHFRRLELKAY 477
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,779,722
Number of Sequences: 59808
Number of extensions: 612229
Number of successful extensions: 2359
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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