Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d17r
(716 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 41 3e-05
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 40 1e-04
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 38 2e-04
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 37 7e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 35 0.002
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 35 0.003
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 31 0.027
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 30 0.062
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 30 0.082
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 29 0.11
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.14
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 29 0.19
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.33
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 26 1.3
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 26 1.3
Z49832-1|CAA89993.1| 155|Anopheles gambiae serine proteinase pr... 24 4.1
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 24 5.4
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 9.5
AF457554-1|AAL68784.1| 269|Anopheles gambiae salivary gland 1-l... 23 9.5
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 41.1 bits (92), Expect = 3e-05
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 232 SWSRRLADPSVGRSTVEAIR--PVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHRIG 399
+W A P+ R V A R P L W++R + F SQVLTGH F E+LH G
Sbjct: 886 AWDAAAAAPTASRYAVWAHRMIPDLHLWMSRRHGEVDFHLSQVLTGHGYFREYLHVCG 943
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 39.5 bits (88), Expect = 1e-04
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 226 MESWSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHRIG 399
+E+W R + + G T I P + W+ R + F SQ L+GH F LHR+G
Sbjct: 856 VEAWQREWSTTTSGSWTRRLI-PNIQPWITRRHGNIEFHMSQFLSGHGFFRSHLHRMG 912
Score = 25.4 bits (53), Expect = 1.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 405 PIAQCHHCGCDLDTAEHALVVC 470
P C CG + TAEH + +C
Sbjct: 915 PSPVCPACGDENQTAEHTIFIC 936
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 38.3 bits (85), Expect = 2e-04
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 220 AHMESWSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHR 393
A M W ++ GR T I P + W++R + + +QVL+GH CF +LHR
Sbjct: 906 ASMRQWQNEWSNSLNGRWTYLLI-PDVGAWLDRKHGDVDYFVTQVLSGHGCFRSYLHR 962
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 36.7 bits (81), Expect = 7e-04
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 226 MESWSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHR 393
M W + GR+T A+ P + W +R + F +Q L+ H CF +LH+
Sbjct: 845 MRKWQSEWDCSTKGRTT-HALIPNIAAWTSRKHGEVNFYMTQFLSDHGCFRSYLHK 899
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 417 CHHCGCDLDTAEHALVVCPAWEGWRRDLFAKIG 515
C C +++ EH L CP + R ++ K G
Sbjct: 908 CPACVSIVESTEHVLFHCPRFAEERHEITVKCG 940
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 35.1 bits (77), Expect = 0.002
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 235 WSRRLADPSVGRSTVEAIR--PVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHRIG 399
W ++P R A R P + W+ + R + F +Q+L+GH F EFLH G
Sbjct: 884 WDANASNPGASRYARWAHRLIPEVHSWMAQKRGEVDFLLAQILSGHRFFREFLHVCG 940
Score = 27.5 bits (58), Expect = 0.44
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 405 PIAQCHHCGCDLDTAEHALVVCPAWEGWRRDL 500
P +C C +++ H L CP + RRDL
Sbjct: 943 PSPECPACTGSVESVAHVLFYCPRFAEVRRDL 974
Score = 23.4 bits (48), Expect = 7.2
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 474 RGRRRAHAPPCPSRNHNGGTVLSARS-DPMQELTKAIMPSEHLRRPESEAYSVTIYPIHK 298
+ +R+A A P R NG V SA + + + R +S+A ++ P+
Sbjct: 1163 QAQRQARAHMLPDRQQNGRAVSSAEELERRRREMERTRRQRQRRARDSQAITIHFSPLPS 1222
Query: 297 D 295
D
Sbjct: 1223 D 1223
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 34.7 bits (76), Expect = 0.003
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 217 DAHMESWSRRLADPSVGRST--VEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFL 387
D E W R T + P + DW +R +TF +QVL+GH F ++L
Sbjct: 935 DCWQEEWDADALQQDASRHTRWTHRVIPSVGDWQSRKHGDMTFHLAQVLSGHGFFRDYL 993
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 31.5 bits (68), Expect = 0.027
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 220 AHMESWSRRL-ADPSVGRSTVEAIR--PVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLH 390
A +E W ++ A+ R T A R P + W +R ++F QVL+GH F ++L
Sbjct: 872 ATIEQWQQQWDAEADTSRHTRWAHRVLPNIGSWQSRKHGDVSFHLCQVLSGHGFFRDYLC 931
Query: 391 RIG 399
R G
Sbjct: 932 RNG 934
Score = 27.1 bits (57), Expect = 0.58
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 417 CHHCGCDLDTAEHALVVCPAWEGWRRDLFAK 509
C C +TAEHA+ CP + R+ L +
Sbjct: 941 CQRCSGVPETAEHAMFECPRFAEVRQQLLGE 971
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 30.3 bits (65), Expect = 0.062
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 226 MESWSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHRI 396
ME W R + GR T I P + W++R + F SQ L+ H + LHR+
Sbjct: 851 MERWQREWDESVHGRWTYRLI-PDVNRWISRRFGGVDFFLSQFLSSHGFYAYQLHRM 906
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.9 bits (64), Expect = 0.082
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 307 WVNRDRVRLTFRPSQVLTGHDCFGEFLHRIG 399
W R + F SQVL+GH EFLH G
Sbjct: 915 WTGRKHGEVDFYLSQVLSGHAFVHEFLHVFG 945
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 29.5 bits (63), Expect = 0.11
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 235 WSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFL 387
W R T IR + W R +TF +QVL+GH F E+L
Sbjct: 948 WDAEADTSRYTRWTHRIIRDISA-WQGRRHGEMTFHLAQVLSGHGFFREYL 997
Score = 26.2 bits (55), Expect = 1.0
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 417 CHHCGCDLDTAEHALVVCPAWEGWRRDLFAKIG 515
C C + A HA+ CP + R + F ++G
Sbjct: 1008 CRSCAGVPENAHHAIFECPRFARVRMEYFGELG 1040
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.14
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 232 SWSRRLADPSVGRSTVEAIR--PVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFL 387
+W A+ R A R P + W +R +TF SQVL+GH F E L
Sbjct: 952 TWGADAANERASRYVRWAHRVIPDVGSWQSRKHGDVTFHLSQVLSGHGFFREHL 1005
Score = 26.6 bits (56), Expect = 0.77
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 417 CHHCGCDLDTAEHALVVCPAWEGWRRDL 500
C C ++AEHA+ CP ++ R +L
Sbjct: 1016 CTRCPGVAESAEHAMFECPRFDSTRTEL 1043
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 28.7 bits (61), Expect = 0.19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 307 WVNRDRVRLTFRPSQVLTGHDCFGEFLHRI 396
W R+ +TF SQVL+GH E+L+++
Sbjct: 919 WQLRNHGEVTFHLSQVLSGHGFLREYLNKM 948
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 0.33
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 229 ESWSRRLADPSVGRST--VEAIRPVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFLHRIG 399
E W + R + P + W R + F SQVL+GH F + L R+G
Sbjct: 900 EEWDADASQADASRFVRWTHRVIPDIAAWHFRRHGEVNFHLSQVLSGHGFFRDDLCRMG 958
Score = 26.6 bits (56), Expect = 0.77
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 405 PIAQCHHCGCDLDTAEHALVVCPAWEGWRRDLFAKIGNE 521
P C C +TAEHA+ CP + R+ L + +
Sbjct: 961 PSPDCIRCTGVPETAEHAMFECPRFAEIRQKLLGEANTD 999
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 229 ESWSRRLADPSVGRSTVEAIRPVLVDWVNRDRVRLTFRPSQVLTGH 366
+ W+ P + P + WV+R + F +Q+LTGH
Sbjct: 874 DQWTTGAGQPGAPGLKTRRLIPDINLWVSRKHGEVDFFLTQLLTGH 919
Score = 24.2 bits (50), Expect = 4.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 417 CHHCGCDLDTAEHALVVCPAWEGWRRDL 500
C CG ++ EH L CP + R ++
Sbjct: 938 CPECGDAVEDVEHVLFHCPRSDRIRNEM 965
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 292 PVLVDWVNRDRVRLTFRPSQVLTGHDCFGEFL 387
P + W +R + F SQ+++GH F ++L
Sbjct: 918 PDIGAWQSRKHGEVNFHLSQIISGHGFFRKYL 949
>Z49832-1|CAA89993.1| 155|Anopheles gambiae serine proteinase
protein.
Length = 155
Score = 24.2 bits (50), Expect = 4.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 398 ERADSTVPPLWLRLGHGGACARRLPRMGGVAP*PLRKNR 514
ER ST+ + L+ CA+RLP M P LR ++
Sbjct: 101 ERLSSTLQKIQLQALDETICAKRLPAMRREMPEGLRDDQ 139
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 149 ASTWRSVNPRQCGSTAPG 202
AS W + NP QC PG
Sbjct: 237 ASCWCNSNPTQCPDLKPG 254
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 23.0 bits (47), Expect = 9.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 509 FCEEVTAPPLPCGADDERMLRRVQVATTMVAL 414
+C+ PPL D ER +R +A T L
Sbjct: 81 YCDTSACPPLIEFCDAERTIRPKNIAGTCCTL 112
>AF457554-1|AAL68784.1| 269|Anopheles gambiae salivary gland 1-like
3 protein protein.
Length = 269
Score = 23.0 bits (47), Expect = 9.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 200 GQRHLTMPIWSHGPGGWPILQLVVAPSRRFARSL 301
GQRHL W +G L L S R R+L
Sbjct: 3 GQRHLIEQAWQYGAQLQHELMLTSMESDRVQRAL 36
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,265
Number of Sequences: 2352
Number of extensions: 18424
Number of successful extensions: 74
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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