Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d17r
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 31 3.1
AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein pr... 31 3.1
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 31 3.1
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 31 3.1
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 31 3.1
U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING dom... 31 4.1
BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING d... 31 4.1
BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING d... 31 4.1
AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING d... 31 4.1
AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING d... 31 4.1
AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein. 31 4.1
BC131591-1|AAI31592.1| 890|Homo sapiens PACS2 protein protein. 31 5.4
BC065220-1|AAH65220.2| 889|Homo sapiens phosphofurin acidic clu... 31 5.4
BC010663-1|AAH10663.1| 759|Homo sapiens PACS2 protein protein. 31 5.4
AY320284-1|AAQ83882.2| 889|Homo sapiens PACS2 protein. 31 5.4
AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein. 31 5.4
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 30 7.2
BC050351-1|AAH50351.2| 889|Homo sapiens phosphofurin acidic clu... 30 7.2
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 30 7.2
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 30 7.2
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 716 PVPRPTCEGXPKQLEGGPGLGRDPPPWPTL 627
PVP+P G PK EG P +D PPW TL
Sbjct: 348 PVPKP--RGTPKPSEGTPAPRKD-PPWITL 374
>AL833860-1|CAD38718.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 716 PVPRPTCEGXPKQLEGGPGLGRDPPPWPTL 627
PVP+P G PK EG P +D PPW TL
Sbjct: 142 PVPKP--RGTPKPSEGTPAPRKD-PPWITL 168
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 716 PVPRPTCEGXPKQLEGGPGLGRDPPPWPTL 627
PVP+P G PK EG P +D PPW TL
Sbjct: 348 PVPKP--RGTPKPSEGTPAPRKD-PPWITL 374
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 716 PVPRPTCEGXPKQLEGGPGLGRDPPPWPTL 627
PVP+P G PK EG P +D PPW TL
Sbjct: 348 PVPKP--RGTPKPSEGTPAPRKD-PPWITL 374
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 716 PVPRPTCEGXPKQLEGGPGLGRDPPPWPTL 627
PVP+P G PK EG P +D PPW TL
Sbjct: 276 PVPKP--RGTPKPSEGTPAPRKD-PPWITL 302
>U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING domain
protein protein.
Length = 777
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 423 GGTVLSARSDPMQELTKAIMPSEHLRRPESEAYSVTIYPIHKDRAN 286
GG +LS + P ++T+ I + RP+S+ T Y I++D N
Sbjct: 699 GGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCN 744
>BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 423 GGTVLSARSDPMQELTKAIMPSEHLRRPESEAYSVTIYPIHKDRAN 286
GG +LS + P ++T+ I + RP+S+ T Y I++D N
Sbjct: 699 GGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCN 744
>BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 423 GGTVLSARSDPMQELTKAIMPSEHLRRPESEAYSVTIYPIHKDRAN 286
GG +LS + P ++T+ I + RP+S+ T Y I++D N
Sbjct: 699 GGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCN 744
>AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING
domain 1 variant protein.
Length = 777
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 423 GGTVLSARSDPMQELTKAIMPSEHLRRPESEAYSVTIYPIHKDRAN 286
GG +LS + P ++T+ I + RP+S+ T Y I++D N
Sbjct: 699 GGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCN 744
>AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING
domain protein protein.
Length = 777
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 423 GGTVLSARSDPMQELTKAIMPSEHLRRPESEAYSVTIYPIHKDRAN 286
GG +LS + P ++T+ I + RP+S+ T Y I++D N
Sbjct: 699 GGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCN 744
>AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein.
Length = 777
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 423 GGTVLSARSDPMQELTKAIMPSEHLRRPESEAYSVTIYPIHKDRAN 286
GG +LS + P ++T+ I + RP+S+ T Y I++D N
Sbjct: 699 GGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCN 744
>BC131591-1|AAI31592.1| 890|Homo sapiens PACS2 protein protein.
Length = 890
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 490 RHPSHAGQTTSACSAVSKSQPQWWHCAIGSLRSDARTHQSNHAQ*AP 350
+HPS GQ S CS++ ++ + I SL S H+ + Q P
Sbjct: 153 QHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGP 199
>BC065220-1|AAH65220.2| 889|Homo sapiens phosphofurin acidic
cluster sorting protein 2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 490 RHPSHAGQTTSACSAVSKSQPQWWHCAIGSLRSDARTHQSNHAQ*AP 350
+HPS GQ S CS++ ++ + I SL S H+ + Q P
Sbjct: 144 QHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGP 190
>BC010663-1|AAH10663.1| 759|Homo sapiens PACS2 protein protein.
Length = 759
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 490 RHPSHAGQTTSACSAVSKSQPQWWHCAIGSLRSDARTHQSNHAQ*AP 350
+HPS GQ S CS++ ++ + I SL S H+ + Q P
Sbjct: 14 QHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGP 60
>AY320284-1|AAQ83882.2| 889|Homo sapiens PACS2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 490 RHPSHAGQTTSACSAVSKSQPQWWHCAIGSLRSDARTHQSNHAQ*AP 350
+HPS GQ S CS++ ++ + I SL S H+ + Q P
Sbjct: 144 QHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGP 190
>AB011174-1|BAA25528.1| 962|Homo sapiens KIAA0602 protein protein.
Length = 962
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 490 RHPSHAGQTTSACSAVSKSQPQWWHCAIGSLRSDARTHQSNHAQ*AP 350
+HPS GQ S CS++ ++ + I SL S H+ + Q P
Sbjct: 202 QHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGP 248
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = -3
Query: 501 RGHGATPPMRGR-----RRAHA-----PPCPSRNHNGGTVLSARS--DPMQELTKAIMPS 358
R HG+ PP RG+ R A PP P RN + ++ + RS D E + P
Sbjct: 347 RMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDF-ESKYSFHPV 405
Query: 357 EHLRRPESEAYSVTIYPIHKDRANR 283
E PE + IYP +RA R
Sbjct: 406 EDFPAPEEYKHFQRIYPSKTNRAAR 430
>BC050351-1|AAH50351.2| 889|Homo sapiens phosphofurin acidic
cluster sorting protein 2 protein.
Length = 889
Score = 30.3 bits (65), Expect = 7.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 490 RHPSHAGQTTSACSAVSKSQPQWWHCAIGSLRSDARTHQSNHAQ*AP 350
+HPS GQ S CS++ ++ + I SL S H+ + Q P
Sbjct: 144 QHPSEGGQVLSLCSSIKEAPVKAADIWIASLSSQPIDHEDSTMQAGP 190
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = -3
Query: 501 RGHGATPPMRGR-----RRAHA-----PPCPSRNHNGGTVLSARS--DPMQELTKAIMPS 358
R HG+ PP RG+ R A PP P RN + ++ + RS D E + P
Sbjct: 347 RMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDF-ESKYSFHPV 405
Query: 357 EHLRRPESEAYSVTIYPIHKDRANR 283
E PE + IYP +RA R
Sbjct: 406 EDFPAPEEYKHFQRIYPSKTNRAAR 430
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 30.3 bits (65), Expect = 7.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = -3
Query: 501 RGHGATPPMRGR-----RRAHA-----PPCPSRNHNGGTVLSARS--DPMQELTKAIMPS 358
R HG+ PP RG+ R A PP P RN + ++ + RS D E + P
Sbjct: 347 RMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDSITTVRSFLDDF-ESKYSFHPV 405
Query: 357 EHLRRPESEAYSVTIYPIHKDRANR 283
E PE + IYP +RA R
Sbjct: 406 EDFPAPEEYKHFQRIYPSKTNRAAR 430
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,565,469
Number of Sequences: 237096
Number of extensions: 3093096
Number of successful extensions: 13403
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13367
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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