Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d17f
         (597 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2QVB3 Cluster: Expressed protein; n=5; Oryza sativa|Re...    35   1.7  
UniRef50_Q0WKL0 Cluster: Possible transcriptional regulator; n=1...    34   2.2  
UniRef50_UPI00005A4FEC Cluster: PREDICTED: hypothetical protein ...    34   2.9  
UniRef50_A4RX33 Cluster: Predicted protein; n=2; Ostreococcus|Re...    33   3.9  
UniRef50_Q4Q763 Cluster: Putative uncharacterized protein; n=3; ...    33   3.9  
UniRef50_Q479J8 Cluster: EAL; n=1; Dechloromonas aromatica RCB|R...    33   6.7  

>UniRef50_Q2QVB3 Cluster: Expressed protein; n=5; Oryza sativa|Rep:
           Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 344

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 344 PPPRDAGPAVVGATTTSPLGQLSEACLDGARLNGLSH*IPRWIRTSVGP 490
           PPP    PAVV    +S  GQ  +A +D    +G    +P W++ S+GP
Sbjct: 8   PPPPPPPPAVVHGAGSSLSGQKRKAAMDDG--SGEDDNVPPWLKLSLGP 54


>UniRef50_Q0WKL0 Cluster: Possible transcriptional regulator; n=10;
           Enterobacteriaceae|Rep: Possible transcriptional
           regulator - Yersinia pestis
          Length = 348

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 24/66 (36%), Positives = 32/66 (48%)
 Frame = -3

Query: 211 LARPPSPVECGSPAISFLPKKRVVLGTDCVATAFLNLLADAFSEGCGATAQIKLGQTSRL 32
           LA P   VE G PA+     + ++LG+D VA    + L    SEG     Q+ L  T R 
Sbjct: 261 LASPQPVVESGDPAVV----RALLLGSDMVAAVSSHQLDFEVSEGILIPLQVNLTGTRRE 316

Query: 31  LGYRTR 14
           +G  TR
Sbjct: 317 IGLMTR 322


>UniRef50_UPI00005A4FEC Cluster: PREDICTED: hypothetical protein
           XP_863487; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_863487 - Canis familiaris
          Length = 312

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 25/73 (34%), Positives = 32/73 (43%)
 Frame = +1

Query: 10  GNEYDSPAVCSFVQA*SER*PRSPQKKHQLGG*GTQ*PRSPCQEPPFFLVRMKSPDFHTP 189
           GN++      S     SER P S     +L G      +SP    P  LV   SP F  P
Sbjct: 162 GNKFRGSCSTSSPSRGSERGPSSAWPSRRLSG-----EQSPPTPTPSDLVLPMSPIFGQP 216

Query: 190 LGMAGGPSRSRTG 228
           LG AG P+ ++ G
Sbjct: 217 LGAAGSPTLAQAG 229


>UniRef50_A4RX33 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 770

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 171 RFHSYQKKGWFLARTAWLLRSLTS*LMLFLRAAGLPLRSS-LDKRADCWAIVLVA 10
           R H  +++GW  A T W    +    ML L   G+  R   L K++D  A V VA
Sbjct: 40  RQHPERRRGWLRATTTWATHPIVVATMLTLGVCGMVAREEMLAKQSDAGAFVRVA 94


>UniRef50_Q4Q763 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1305

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -3

Query: 256 WIVERQKVFSRFDSDLARPPSPVECGSPAISFLPKKRVVLGTDCVA 119
           W  E  +V   FD  L RPP PV+     +S     +  LGT   A
Sbjct: 4   WRAEASRVIKAFDDALGRPPFPVDAPDDLVSKAEAVQATLGTVAAA 49


>UniRef50_Q479J8 Cluster: EAL; n=1; Dechloromonas aromatica RCB|Rep:
           EAL - Dechloromonas aromatica (strain RCB)
          Length = 561

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = -1

Query: 273 HARFRCGLLSDRRFLAGSTPTWPARHPQWSVEVRRFHSYQKKGWFLARTAWLLRSLTS*L 94
           H + +  + SDR F A     W   +  W          ++ GW    T WL+RS    L
Sbjct: 326 HLQPQVDVESDRCFGAELLLRWQRSNGDWVAPSLVVEMIEEYGWRAQFTEWLIRSALR-L 384

Query: 93  MLFLRAAGLPLRSSLDKRA 37
              L AAG+ +R SL+  A
Sbjct: 385 SAELDAAGVDIRLSLNLTA 403


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,978,020
Number of Sequences: 1657284
Number of extensions: 13660949
Number of successful extensions: 41097
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41083
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)