BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12d17f (597 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC008780-1|AAH08780.1| 241|Homo sapiens peroxisomal biogenesis ... 30 5.4 AB095921-1|BAD01558.1| 241|Homo sapiens peroxin Pex11p gamma pr... 30 5.4 X85133-1|CAA59445.1| 948|Homo sapiens RB protein binding protei... 29 9.5 CR456470-1|CAG30356.1| 578|Homo sapiens dJ439F8.1 protein. 29 9.5 BC129837-1|AAI29838.1| 578|Homo sapiens death-inducing-protein ... 29 9.5 AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 29 9.5 AL096766-2|CAI18820.1| 578|Homo sapiens protein ( Human DNA seq... 29 9.5 AL021392-1|CAI20966.1| 578|Homo sapiens protein ( Human DNA seq... 29 9.5 AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation potential... 29 9.5 AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 29 9.5 AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 29 9.5 AB018310-1|BAA34487.2| 598|Homo sapiens KIAA0767 protein protein. 29 9.5 >BC008780-1|AAH08780.1| 241|Homo sapiens peroxisomal biogenesis factor 11 gamma protein. Length = 241 Score = 30.3 bits (65), Expect = 5.4 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = -1 Query: 210 WPARHPQWSVEVRRFHSYQKKGWFLARTAWLLRSL 106 +P H W+ + R H + W L+ T W L L Sbjct: 104 YPCEHVAWAADARVLHVDSSRWWTLSTTLWALSLL 138 >AB095921-1|BAD01558.1| 241|Homo sapiens peroxin Pex11p gamma protein. Length = 241 Score = 30.3 bits (65), Expect = 5.4 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = -1 Query: 210 WPARHPQWSVEVRRFHSYQKKGWFLARTAWLLRSL 106 +P H W+ + R H + W L+ T W L L Sbjct: 104 YPCEHVAWAADARVLHVDSSRWWTLSTTLWALSLL 138 >X85133-1|CAA59445.1| 948|Homo sapiens RB protein binding protein protein. Length = 948 Score = 29.5 bits (63), Expect = 9.5 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 529 RFRQEHPGDGRPVWTHAGSNPAGYSVG*PIQ 437 R PG GRP W H SN GY V P Q Sbjct: 316 RINTARPGGGRPGWEH--SNKLGYLVSPPQQ 344 >CR456470-1|CAG30356.1| 578|Homo sapiens dJ439F8.1 protein. Length = 578 Score = 29.5 bits (63), Expect = 9.5 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query: 72 PQPSEKASA---RRLRNAVATQSVPRTTLFFGKNEIAGLPHSTGDG 200 PQ E++SA RRL+ + VP GK E AG HST G Sbjct: 400 PQLKERSSAAVSRRLQTTSSRSYVPSAPAGLGKEEDAGRFHSTKKG 445 >BC129837-1|AAI29838.1| 578|Homo sapiens death-inducing-protein protein. Length = 578 Score = 29.5 bits (63), Expect = 9.5 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query: 72 PQPSEKASA---RRLRNAVATQSVPRTTLFFGKNEIAGLPHSTGDG 200 PQ E++SA RRL+ + VP GK E AG HST G Sbjct: 400 PQLKERSSAAVSRRLQTTSSRSYVPSAPAGLGKEEDAGRFHSTKKG 445 >AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular protein PACT protein. Length = 1625 Score = 29.5 bits (63), Expect = 9.5 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 529 RFRQEHPGDGRPVWTHAGSNPAGYSVG*PIQ 437 R PG GRP W H SN GY V P Q Sbjct: 359 RINTARPGGGRPGWEH--SNKLGYLVSPPQQ 387 >AL096766-2|CAI18820.1| 578|Homo sapiens protein ( Human DNA sequence from clone RP6-59H18 on chromosome 22. ). Length = 578 Score = 29.5 bits (63), Expect = 9.5 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query: 72 PQPSEKASA---RRLRNAVATQSVPRTTLFFGKNEIAGLPHSTGDG 200 PQ E++SA RRL+ + VP GK E AG HST G Sbjct: 400 PQLKERSSAAVSRRLQTTSSRSYVPSAPAGLGKEEDAGRFHSTKKG 445 >AL021392-1|CAI20966.1| 578|Homo sapiens protein ( Human DNA sequence from clone RP3-439F8 on chromosome 22q13.31-33. ). Length = 578 Score = 29.5 bits (63), Expect = 9.5 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query: 72 PQPSEKASA---RRLRNAVATQSVPRTTLFFGKNEIAGLPHSTGDG 200 PQ E++SA RRL+ + VP GK E AG HST G Sbjct: 400 PQLKERSSAAVSRRLQTTSSRSYVPSAPAGLGKEEDAGRFHSTKKG 445 >AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation potential-related protein protein. Length = 1616 Score = 29.5 bits (63), Expect = 9.5 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 529 RFRQEHPGDGRPVWTHAGSNPAGYSVG*PIQ 437 R PG GRP W H SN GY V P Q Sbjct: 316 RINTARPGGGRPGWEH--SNKLGYLVSPPQQ 344 >AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding protein 6 isoform 2 protein. Length = 1758 Score = 29.5 bits (63), Expect = 9.5 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 529 RFRQEHPGDGRPVWTHAGSNPAGYSVG*PIQ 437 R PG GRP W H SN GY V P Q Sbjct: 492 RINTARPGGGRPGWEH--SNKLGYLVSPPQQ 520 >AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding protein 6 isoform 1 protein. Length = 1792 Score = 29.5 bits (63), Expect = 9.5 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = -3 Query: 529 RFRQEHPGDGRPVWTHAGSNPAGYSVG*PIQ 437 R PG GRP W H SN GY V P Q Sbjct: 492 RINTARPGGGRPGWEH--SNKLGYLVSPPQQ 520 >AB018310-1|BAA34487.2| 598|Homo sapiens KIAA0767 protein protein. Length = 598 Score = 29.5 bits (63), Expect = 9.5 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query: 72 PQPSEKASA---RRLRNAVATQSVPRTTLFFGKNEIAGLPHSTGDG 200 PQ E++SA RRL+ + VP GK E AG HST G Sbjct: 420 PQLKERSSAAVSRRLQTTSSRSYVPSAPAGLGKEEDAGRFHSTKKG 465 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 95,561,947 Number of Sequences: 237096 Number of extensions: 2199125 Number of successful extensions: 6206 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5952 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6204 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 6324506272 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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