Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d16r
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-20|AAP46262.1|  132|Caenorhabditis elegans Hypothetical...    32   0.30 
AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    32   0.30 
AF000299-3|AAW88403.1|  342|Caenorhabditis elegans Serpentine re...    31   0.69 
Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>AC090999-20|AAP46262.1|  132|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16b protein.
          Length = 132

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 541 QDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVAFTF 368
           Q  F K  +T  YAA+   +   F  ++ +   GF +TI R+G I    + M +A  F
Sbjct: 13  QMAFTKGSITGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQF 70


>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 541 QDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVAFTF 368
           Q  F K  +T  YAA+   +   F  ++ +   GF +TI R+G I    + M +A  F
Sbjct: 456 QMAFTKGSITGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQF 513


>AF000299-3|AAW88403.1|  342|Caenorhabditis elegans Serpentine
           receptor, class z protein24, isoform a protein.
          Length = 342

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +3

Query: 33  YFLKFIYIFYMIFYCLEPS-----VHPFNSSISLRRVQSCLTDLIVLV 161
           Y LKFI+IFY++F   E +     V  F+  I+ +   S + DLI  +
Sbjct: 160 YILKFIWIFYLLFVIKESTGIILYVLKFSKMITTKENHSVILDLITFI 207


>Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 219 W*RRQASMKAGSFSQMRHNLLKQSNQLN 136
           W R+QA M++G F+ +RH++      LN
Sbjct: 247 WSRKQALMRSGEFAALRHSINLDCTLLN 274


>AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 219 W*RRQASMKAGSFSQMRHNLLKQSNQLN 136
           W R+QA M++G F+ +RH++      LN
Sbjct: 247 WSRKQALMRSGEFAALRHSINLDCTLLN 274


>Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical
           protein T27D12.1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 48  IYIFYMIFYCLEPSVHPFNSSISLRRV 128
           +++ Y +FY   P  HPF  ++ L+++
Sbjct: 210 LFVTYALFYRNSPQKHPFVGNVELKKI 236


>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
           protein B0379.3b protein.
          Length = 1050

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = -1

Query: 373 TFTTNVAQNIRGKNDKLNYFLGGATSGFVFSAWMKKGIIAVP 248
           T   N+ QN+ G+ND  +Y    A++  +   ++   +++ P
Sbjct: 91  TIPDNLIQNVIGRNDNADYDFSDASNPEIMKLFLSSSLLSNP 132


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +3

Query: 234 STTAAGTAIIPFFIQALNTKPDVAPPKK*LSLSFFPRIFWAT 359
           STT   T   PFF   +   P V PP     L+ F R  W T
Sbjct: 769 STTTTTTIPPPFFALPVPPPPPVPPPPPPPFLTCFSRDTWVT 810


>Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical
           protein F21C3.2 protein.
          Length = 813

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 437 CQYNRSNGLYCRPSSGYGSCLHIHYQRCPKYSWEKR 330
           CQ   S G+ CRP+  YG C   HY  C   +W +R
Sbjct: 736 CQCKVSCGV-CRPNYVYGPCADYHYD-CA--AWARR 767


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,088,600
Number of Sequences: 27780
Number of extensions: 307981
Number of successful extensions: 866
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)