Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d16f
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-20|AAP46262.1|  132|Caenorhabditis elegans Hypothetical...    32   0.26 
AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    32   0.26 
Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U51995-6|AAA96074.1|  430|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U41011-5|AAA82288.2|  320|Caenorhabditis elegans Fatty acid elon...    27   9.7  

>AC090999-20|AAP46262.1|  132|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16b protein.
          Length = 132

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 97  QDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVAFTF 270
           Q  F K  +T  YAA+   +   F  ++ +   GF +TI R+G I    + M +A  F
Sbjct: 13  QMAFTKGSITGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQF 70


>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 97  QDIFMKTFVTSKYAAVAGLAGASFDVLMFSHPKGFVNTIGRMGYIVGPLVGMAVAFTF 270
           Q  F K  +T  YAA+   +   F  ++ +   GF +TI R+G I    + M +A  F
Sbjct: 456 QMAFTKGSITGVYAAIYTYSPELFPTVIRNTAMGFCSTIARVGAIAASYISMWIAEQF 513


>Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 419 W*RRQASMKAGSFSQMRHNLLKQSNQLN 502
           W R+QA M++G F+ +RH++      LN
Sbjct: 247 WSRKQALMRSGEFAALRHSINLDCTLLN 274


>AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 419 W*RRQASMKAGSFSQMRHNLLKQSNQLN 502
           W R+QA M++G F+ +RH++      LN
Sbjct: 247 WSRKQALMRSGEFAALRHSINLDCTLLN 274


>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
           protein B0379.3b protein.
          Length = 1050

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = +1

Query: 265 TFTTNVAQNIRGKNDKLNYFLGGATSGFVFSAWMKKGIIAVP 390
           T   N+ QN+ G+ND  +Y    A++  +   ++   +++ P
Sbjct: 91  TIPDNLIQNVIGRNDNADYDFSDASNPEIMKLFLSSSLLSNP 132


>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
           protein K02E2.2 protein.
          Length = 1021

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -3

Query: 404 STTAAGTAIIPFFIQALNTKPDVAPPKK*LSLSFFPRIFWAT 279
           STT   T   PFF   +   P V PP     L+ F R  W T
Sbjct: 769 STTTTTTIPPPFFALPVPPPPPVPPPPPPPFLTCFSRDTWVT 810


>Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical
           protein F21C3.2 protein.
          Length = 813

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 201 CQYNRSNGLYCRPSSGYGSCLHIHYQRCPKYSWEKR 308
           CQ   S G+ CRP+  YG C   HY  C   +W +R
Sbjct: 736 CQCKVSCGV-CRPNYVYGPCADYHYD-CA--AWARR 767


>U51995-6|AAA96074.1|  430|Caenorhabditis elegans Hypothetical
           protein F07G6.3 protein.
          Length = 430

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -3

Query: 542 PFNSSISLRRVQSCLTDLIVLVDCAASGKKIQPSSMPVFFTTAIAPSTTA 393
           P NS+I L   Q+C +  IV ++C+ +  + +  +  +    AI   TTA
Sbjct: 227 PLNSNI-LENFQNCESTSIVTIECSKTDYETEHETQIIDSPDAIQKETTA 275


>U41011-5|AAA82288.2|  320|Caenorhabditis elegans Fatty acid
           elongation protein 3 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 219 STDCIDKTFWMREHKHIKRSTSKTGYCSIFTGYKCLHEY 103
           S D    T WM+ H +   + S      IFTG K + +Y
Sbjct: 24  SFDAFRSTTWMQNHWYQSITASVVYVAVIFTGKKIMEKY 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,258,858
Number of Sequences: 27780
Number of extensions: 285812
Number of successful extensions: 782
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)