Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d15r
         (727 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0170 + 12551040-12551209,12551297-12551362,12552438-125525...   134   5e-32
09_06_0064 + 20627265-20627538,20628062-20628274,20628772-206288...   106   2e-23
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422...    31   1.2  
05_07_0083 + 27580710-27580767,27580869-27580924,27581024-275811...    28   6.6  

>06_02_0170 +
           12551040-12551209,12551297-12551362,12552438-12552504,
           12552588-12552656,12552771-12552911,12553202-12553330,
           12554002-12554088,12554664-12554738,12554839-12554916,
           12555014-12555091,12555173-12555235,12555341-12555415
          Length = 365

 Score =  134 bits (325), Expect = 5e-32
 Identities = 76/180 (42%), Positives = 106/180 (58%)
 Frame = -1

Query: 667 EKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRGTSVILC 488
           + +  RP + D L+ + +K  K     A IFVDNSG DI+LGILPF R LL  GT VIL 
Sbjct: 188 QNLVSRPWVIDDLDAFQNKWTKKSWEKAVIFVDNSGADIILGILPFARELLRHGTKVILA 247

Query: 487 ANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLVVKSSGQRGPCLDFRTISIGLC 308
           AN+ P++NDVT  EL EI+         L A +   DL+V +SG   P +D  ++S  L 
Sbjct: 248 ANDMPSINDVTYPELVEIINKLKDENGKL-AGVDASDLLVANSGNDLPVIDLSSVSPELA 306

Query: 307 TEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRLGGPLFSVIFIYED 128
                   DL++LEGMGRA+ TN  A +  DS+K+ +VK+  +AQ LGG L+  +F + +
Sbjct: 307 --YLANDADLVVLEGMGRAIETNLYAQMKCDSIKIGMVKHPEVAQFLGGRLYDCVFKFNE 364


>09_06_0064 + 20627265-20627538,20628062-20628274,20628772-20628827,
            20629417-20629533,20629701-20629820,20629910-20630004,
            20630092-20630185,20630406-20630537,20631190-20631302,
            20631423-20631657,20631950-20632028,20632029-20632161,
            20632780-20632821,20632902-20632950,20633443-20633525,
            20633686-20633802,20633893-20633956,20634334-20634486,
            20635043-20635126,20635207-20635401,20635507-20635578,
            20635599-20635610
          Length = 843

 Score =  106 bits (255), Expect = 2e-23
 Identities = 66/149 (44%), Positives = 81/149 (54%), Gaps = 21/149 (14%)
 Frame = -1

Query: 586  AAIFVDNSGVDIVLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICP 407
            A +FVDNSG D+VLG++P  R LL  GT V+L AN  PALNDVT  EL  I+  A+  C 
Sbjct: 695  ALLFVDNSGADVVLGMIPLARELLRNGTEVVLVANSLPALNDVTANELPGIVAEAAKHCG 754

Query: 406  VLAAALSTGDLV---------------------VKSSGQRGPCLDFRTISIGLCTEMKVR 290
            +L  A   G L+                     V  +G   PC+DFR +S  L    K  
Sbjct: 755  ILRKAAEAGGLIFDAMAGIQDDLKDEPVSVPLMVVENGCGSPCIDFRQVSSELAAAAK-- 812

Query: 289  GVDLIILEGMGRALHTNFNACLAVDSLKL 203
              DL+ILEGMGR+LHTN NA    D+LKL
Sbjct: 813  DADLLILEGMGRSLHTNLNARFKCDTLKL 841


>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
            11242381-11242449,11242551-11243480,11243868-11243906,
            11244414-11244478,11244663-11244768,11244850-11245050,
            11247001-11247201,11247756-11247779,11249425-11249586,
            11249676-11249915,11250267-11250479,11250618-11250968,
            11251041-11251193,11251649-11251858,11252049-11252267,
            11252365-11252482,11252879-11253828,11254023-11254220,
            11254294-11254553,11255316-11255505,11255817-11256169,
            11258278-11258386,11258466-11258615,11258748-11258844,
            11259315-11259415
          Length = 2065

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 718  GAQAVTSILDCGLYEALEKIQKRPXLFDGLEKWLDKLEKTVHH 590
            GA ++   L+C   +A +KIQ     F G+  WL +   +  H
Sbjct: 1870 GANSLAEQLECSPEDAAQKIQSFKRFFPGVSSWLHEAVASCRH 1912


>05_07_0083 +
           27580710-27580767,27580869-27580924,27581024-27581133,
           27582083-27582148,27582149-27582278,27582636-27582737,
           27582969-27583010,27583153-27583194,27583356-27583432,
           27583730-27583856,27583953-27584120,27584359-27584484,
           27584575-27584685,27584776-27584910,27585540-27585614,
           27585827-27585934,27586015-27586101,27586187-27586273,
           27586762-27586830
          Length = 591

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 538 KYQELYQPHYYQQIWLHSDEQFSPIYPTIFLNHQTAXVFSGFFQGLHKGHSLR 696
           K  E Y+     + +LH  E  SP+YP I+ +++T         G H   +L+
Sbjct: 196 KLMEFYKSDMKLKKFLHIIEN-SPVYPVIYDSNRTVLSLPPIINGAHSAITLK 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,215,543
Number of Sequences: 37544
Number of extensions: 356407
Number of successful extensions: 744
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)