Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d15r
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC043496-1|AAH43496.1| 773|Homo sapiens pantothenate kinase 4 p... 210 4e-54
AK001644-1|BAA91805.1| 773|Homo sapiens protein ( Homo sapiens ... 210 4e-54
AK223546-1|BAD97266.1| 773|Homo sapiens pantothenate kinase 4 v... 210 5e-54
BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein. 31 5.6
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 31 5.6
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 31 5.6
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 31 5.6
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 7.3
>BC043496-1|AAH43496.1| 773|Homo sapiens pantothenate kinase 4
protein.
Length = 773
Score = 210 bits (513), Expect = 4e-54
Identities = 103/200 (51%), Positives = 138/200 (69%), Gaps = 4/200 (2%)
Frame = -1
Query: 718 GAQAVTSILDC----GLYEALEKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDI 551
GA+AV+++L+ G EA K+Q+RP L D +WL +L+ H CA IF DNSG+DI
Sbjct: 570 GAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDI 629
Query: 550 VLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLV 371
+LG+ PFVR LLLRGT VIL N PALNDVT+ E + + + + PV+ +AL L+
Sbjct: 630 ILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLL 689
Query: 370 VKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
+ +G PCLD + GL ++ RG DL+++EGMGRA+HTN++A L +SLKLAV+K
Sbjct: 690 LVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIK 749
Query: 190 NAWLAQRLGGPLFSVIFIYE 131
NAWLA+RLGG LFSVIF YE
Sbjct: 750 NAWLAERLGGRLFSVIFKYE 769
>AK001644-1|BAA91805.1| 773|Homo sapiens protein ( Homo sapiens cDNA
FLJ10782 fis, clone NT2RP4000415. ).
Length = 773
Score = 210 bits (513), Expect = 4e-54
Identities = 103/200 (51%), Positives = 138/200 (69%), Gaps = 4/200 (2%)
Frame = -1
Query: 718 GAQAVTSILDC----GLYEALEKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDI 551
GA+AV+++L+ G EA K+Q+RP L D +WL +L+ H CA IF DNSG+DI
Sbjct: 570 GAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDI 629
Query: 550 VLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLV 371
+LG+ PFVR LLLRGT VIL N PALNDVT+ E + + + + PV+ +AL L+
Sbjct: 630 ILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLL 689
Query: 370 VKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
+ +G PCLD + GL ++ RG DL+++EGMGRA+HTN++A L +SLKLAV+K
Sbjct: 690 LVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIK 749
Query: 190 NAWLAQRLGGPLFSVIFIYE 131
NAWLA+RLGG LFSVIF YE
Sbjct: 750 NAWLAERLGGRLFSVIFKYE 769
>AK223546-1|BAD97266.1| 773|Homo sapiens pantothenate kinase 4
variant protein.
Length = 773
Score = 210 bits (512), Expect = 5e-54
Identities = 103/200 (51%), Positives = 138/200 (69%), Gaps = 4/200 (2%)
Frame = -1
Query: 718 GAQAVTSILDC----GLYEALEKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDI 551
GA+AV+++L+ G EA K+Q+RP L D +WL +L+ H CA IF DNSG+DI
Sbjct: 570 GAKAVSAVLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDI 629
Query: 550 VLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLV 371
+LG+ PFVR LLLRGT VIL N PALNDVT+ E + + + + PV+ +AL L+
Sbjct: 630 ILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALREERLL 689
Query: 370 VKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
+ +G PCLD + GL ++ RG DL+++EGMGRA+HTN++A L +SLKLAV+K
Sbjct: 690 LVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIK 749
Query: 190 NAWLAQRLGGPLFSVIFIYE 131
NAWLA+RLGG LFSVIF YE
Sbjct: 750 NAWLAERLGGRLFSVIFKYE 769
>BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein.
Length = 719
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 480 SLAQSITDVPLSNKPRTNGKIPRTISTPLLS 572
S A S T P S++PRT +PRT P+L+
Sbjct: 492 STAHSQTTPPPSSRPRTTASVPRTTVWPVLT 522
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 480 SLAQSITDVPLSNKPRTNGKIPRTISTPLLS 572
S A S T P S++PRT +PRT P+L+
Sbjct: 1010 STAHSQTTPPPSSRPRTTASVPRTTVWPVLT 1040
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 480 SLAQSITDVPLSNKPRTNGKIPRTISTPLLS 572
S A S T P S++PRT +PRT P+L+
Sbjct: 991 STAHSQTTPPPSSRPRTTASVPRTTVWPVLT 1021
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 480 SLAQSITDVPLSNKPRTNGKIPRTISTPLLS 572
S A S T P S++PRT +PRT P+L+
Sbjct: 1010 STAHSQTTPPPSSRPRTTASVPRTTVWPVLT 1040
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens cDNA
FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 59 EYWHNHDFHNILIFTVLLC 115
+YW N++FHN +IF L C
Sbjct: 1096 DYWSNYEFHNRVIFFYLSC 1114
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 7.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 59 EYWHNHDFHNILIFTVLLC 115
+YW N++FHN +IF L C
Sbjct: 1841 DYWSNYEFHNRVIFFYLSC 1859
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,639,220
Number of Sequences: 237096
Number of extensions: 2095587
Number of successful extensions: 7051
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7051
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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