Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d15r
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121699-1|AAM52026.1|  389|Drosophila melanogaster RE73673p pro...   227   2e-59
AE014134-881|AAF52219.1|  361|Drosophila melanogaster CG5828-PA ...   227   2e-59
AF145655-1|AAD38630.1|  667|Drosophila melanogaster BcDNA.GH0914...    29   4.9  
AE013599-297|AAF59298.1|  667|Drosophila melanogaster CG4445-PA ...    29   4.9  
X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding ...    29   8.5  
AY060979-1|AAL28527.1|  114|Drosophila melanogaster GM13088p pro...    29   8.5  

>AY121699-1|AAM52026.1|  389|Drosophila melanogaster RE73673p
           protein.
          Length = 389

 Score =  227 bits (554), Expect = 2e-59
 Identities = 110/201 (54%), Positives = 145/201 (72%), Gaps = 5/201 (2%)
 Frame = -1

Query: 718 GAQAVTSILD----CGLYEALEKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDI 551
           GAQA+++IL+     GL+ AL++I+KRP L D L+ WL++L+   H CA +FVDNSGVD+
Sbjct: 184 GAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLNRLKGEPHKCAVVFVDNSGVDV 243

Query: 550 VLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLV 371
           VLG+LPFVRGLL RGT V+LCAN  PALNDVT+ EL+ +L   S  C VL  A S G L+
Sbjct: 244 VLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCSRECEVLEQAWSKGQLL 303

Query: 370 VKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
           V ++GQ GPCLD RT+   LC  +     DL+++EGMGRALHTN NA    ++LKLAV+K
Sbjct: 304 VYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNARFGCETLKLAVIK 363

Query: 190 NAWLAQRLGG-PLFSVIFIYE 131
           N WLA+ LGG  +F+V+  +E
Sbjct: 364 NKWLAKYLGGEDMFAVVCKFE 384


>AE014134-881|AAF52219.1|  361|Drosophila melanogaster CG5828-PA
           protein.
          Length = 361

 Score =  227 bits (554), Expect = 2e-59
 Identities = 110/201 (54%), Positives = 145/201 (72%), Gaps = 5/201 (2%)
 Frame = -1

Query: 718 GAQAVTSILD----CGLYEALEKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDI 551
           GAQA+++IL+     GL+ AL++I+KRP L D L+ WL++L+   H CA +FVDNSGVD+
Sbjct: 156 GAQAISNILEQDSNFGLHSALDRIEKRPWLLDNLDSWLNRLKGEPHKCAVVFVDNSGVDV 215

Query: 550 VLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLV 371
           VLG+LPFVRGLL RGT V+LCAN  PALNDVT+ EL+ +L   S  C VL  A S G L+
Sbjct: 216 VLGVLPFVRGLLKRGTKVLLCANSEPALNDVTSEELKSLLDDCSRECEVLEQAWSKGQLL 275

Query: 370 VKSSGQRGPCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
           V ++GQ GPCLD RT+   LC  +     DL+++EGMGRALHTN NA    ++LKLAV+K
Sbjct: 276 VYANGQTGPCLDMRTLPKELCDAIAANETDLLVIEGMGRALHTNLNARFGCETLKLAVIK 335

Query: 190 NAWLAQRLGG-PLFSVIFIYE 131
           N WLA+ LGG  +F+V+  +E
Sbjct: 336 NKWLAKYLGGEDMFAVVCKFE 356


>AF145655-1|AAD38630.1|  667|Drosophila melanogaster BcDNA.GH09147
           protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -1

Query: 346 PCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
           P      +++G CT    + +D+ ++   G+ + TN N CL     KL V+K
Sbjct: 535 PRSSLSAVTVGDCTS-HAQSMDMFVITPKGQIM-TNDNVCLTYRQQKLGVIK 584


>AE013599-297|AAF59298.1|  667|Drosophila melanogaster CG4445-PA
           protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -1

Query: 346 PCLDFRTISIGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVK 191
           P      +++G CT    + +D+ ++   G+ + TN N CL     KL V+K
Sbjct: 535 PRSSLSAVTVGDCTS-HAQSMDMFVITPKGQIM-TNDNVCLTYRQQKLGVIK 584


>X89858-1|CAA61954.1| 1201|Drosophila melanogaster actin binding
           protein protein.
          Length = 1201

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 460 VTNIELEEILQHASLICPVLAAALST 383
           +T I  EE+ QH + + PV AAA +T
Sbjct: 373 ITQIRAEEVKQHLAAVHPVTAAAATT 398


>AY060979-1|AAL28527.1|  114|Drosophila melanogaster GM13088p
           protein.
          Length = 114

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 86  CENHDYASIQCN*FMNFLQCFCIHIL 9
           C ++D     CN F+ F  C+CI +L
Sbjct: 58  CSSNDCGCCSCNFFLFFFCCYCILVL 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,027,470
Number of Sequences: 53049
Number of extensions: 624581
Number of successful extensions: 1320
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)