Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12d15r
(727 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35360.1 68417.m05024 pantothenate kinase family protein cont... 126 2e-29
At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family p... 126 2e-29
At2g17320.1 68415.m02001 pantothenate kinase-related similar to ... 125 3e-29
At2g17340.1 68415.m02003 pantothenate kinase-related contains Pf... 125 3e-29
At5g43670.1 68418.m05337 transport protein, putative similar to ... 29 4.1
At2g19390.1 68415.m02262 expressed protein 29 4.1
At4g12620.1 68417.m01988 replication control protein, putative s... 28 5.5
At1g26170.1 68414.m03194 importin beta-2 subunit family protein ... 28 7.2
At1g14170.1 68414.m01675 KH domain-containing protein location o... 27 9.6
>At4g35360.1 68417.m05024 pantothenate kinase family protein
contains Pfam domain, PF01937: Protein of unknown
function; similar to SP|Q9NVE7 Pantothenate kinase 4 (EC
2.7.1.33) (Pantothenic acid kinase 4) (hPanK4) {Homo
sapiens}
Length = 367
Score = 126 bits (303), Expect = 2e-29
Identities = 74/183 (40%), Positives = 103/183 (56%)
Frame = -1
Query: 667 EKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRGTSVILC 488
+ + RP + D L+ + + K A IFVDNSG DI+LGILPF R +L G V+L
Sbjct: 188 QNLVSRPWVIDDLDNFQARWLKKPWKKAVIFVDNSGADIILGILPFAREMLRLGMQVVLA 247
Query: 487 ANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLVVKSSGQRGPCLDFRTISIGLC 308
ANE P++NDVT IEL EIL + L + T +L++ +SG P +D +S +
Sbjct: 248 ANELPSINDVTYIELAEILSKLNDENGQL-MGVDTSNLLIANSGNDLPVIDLARVSQEVA 306
Query: 307 TEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRLGGPLFSVIFIYED 128
DL+ILEGMGR + TN A DSLK+ +VK+ +AQ LGG L+ + Y +
Sbjct: 307 --YLSSDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVIKYNE 364
Query: 127 TPI 119
I
Sbjct: 365 VQI 367
>At4g32180.1 68417.m04580 eukaryotic pantothenate kinase family
protein similar to pantothenate kinase [Emericella
nidulans] GI:4191500; contains Pfam profiles PF03630:
Fumble, PF01937: Protein of unknown function
Length = 901
Score = 126 bits (303), Expect = 2e-29
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 22/177 (12%)
Frame = -1
Query: 595 HHCAAIFVDNSGVDIVLGILPFVRGLLLRGTSVILCANEWPALNDVTNIELEEILQHASL 416
H A +FVDNSG D++LG+LP R L RGT V+L AN PALNDVT +EL +I+ A+
Sbjct: 723 HKRALLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPALNDVTAMELPDIVAGAAK 782
Query: 415 ICPVLAAALSTGDLVVKS---------------------SGQRGPCLDFRTISIGLCTEM 299
C +L A G L+V + +G PC+D R +S L
Sbjct: 783 HCDILRRAAEMGGLLVDAMVNPGDGSKKDSTSAPLMVVENGCGSPCIDLRQVSSELAAAA 842
Query: 298 KVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRL-GGPLFSVIFIYE 131
K DL++LEGMGRALHTNFNA ++LKLA+VKN LA++L G ++ + YE
Sbjct: 843 K--DADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYE 897
>At2g17320.1 68415.m02001 pantothenate kinase-related similar to
Probable pantothenate kinase 1 (Pantothenic acid kinase
1) (Swiss-Prot:Q8L5Y9) [Arabidopsis thaliana]; similar
to Pantothenate kinase 4 (Pantothenic acid kinase 4)
(hPanK4) (Swiss-Prot:Q9NVE7) [Homo sapiens]; contains
Pfam PF01937: Protein of unknown function
Length = 361
Score = 125 bits (302), Expect = 3e-29
Identities = 75/180 (41%), Positives = 100/180 (55%)
Frame = -1
Query: 667 EKIQKRPXLFDGLEKWLDKLEKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRGTSVILC 488
+ + RP + D L K+ K K A IFVDNSG DI+LGILPF R LL RG V+L
Sbjct: 182 QNLVPRPWVIDDLNKFQAKWVKKPWKKAVIFVDNSGADIILGILPFARELLRRGIQVVLA 241
Query: 487 ANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLVVKSSGQRGPCLDFRTISIGLC 308
ANE PA+NDVT EL +I+ L + T L++ +SG +D +S L
Sbjct: 242 ANELPAINDVTYTELTDIVSQLKDGNGQL-IGVDTSKLLIANSGNDLAVIDLSRVSHELA 300
Query: 307 TEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRLGGPLFSVIFIYED 128
DL+ILEGMGR + TN A DSLK+ +VK+ +AQ LGG L+ +F + +
Sbjct: 301 --YLSSDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHVEVAQFLGGRLYDCVFKFNE 358
>At2g17340.1 68415.m02003 pantothenate kinase-related contains Pfam
domain, PF01937: Protein of unknown function; supported
by tandem duplication of pantothenate kinase -related
protein (TIGR_Ath1:At2g17320) [Arabidopsis thaliana]
Length = 367
Score = 125 bits (301), Expect = 3e-29
Identities = 76/184 (41%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Frame = -1
Query: 667 EKIQKRPXLFDGLE----KWLDKLEKTVHHCAAIFVDNSGVDIVLGILPFVRGLLLRGTS 500
+ + RP + D LE KW++K K A IFVDNSG DI+LGILPF R LL RG
Sbjct: 188 QNLVPRPWVIDDLENFQAKWINKSWKK----AVIFVDNSGADIILGILPFARELLRRGAQ 243
Query: 499 VILCANEWPALNDVTNIELEEILQHASLICPVLAAALSTGDLVVKSSGQRGPCLDFRTIS 320
V+L ANE P++ND+T EL EIL L + T L++ +SG P +D +S
Sbjct: 244 VVLAANELPSINDITCTELTEILSQLKDENGQL-LGVDTSKLLIANSGNDLPVIDLSRVS 302
Query: 319 IGLCTEMKVRGVDLIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRLGGPLFSVIF 140
L DL+I+EGMGR + TN A DSLK+ +VK+ +A+ LGG L+ +F
Sbjct: 303 QELA--YLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVF 360
Query: 139 IYED 128
+ +
Sbjct: 361 KFNE 364
>At5g43670.1 68418.m05337 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 794
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 8 SRYECRNIVESS*INYTEYWHNHDFHNILIFTVLLCSNRGVFINKYYRKQWSSKSLC*PR 187
++ +C ++V I YT H + I + L+CS G +N Y R + S+ P
Sbjct: 22 TKSDCESLVVPLSIMYTPLMHFSELPTIP-YDPLICSRCGAVLNPYARVDYQSRIWSCPF 80
Query: 188 ILH 196
H
Sbjct: 81 CFH 83
>At2g19390.1 68415.m02262 expressed protein
Length = 1211
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 637 DGLEKWLDKLEKTVHHCAAIFVDNSGVDIV 548
DG ++K+ HHC F DNS +D V
Sbjct: 805 DGSAILFKGVDKSAHHCNGKFPDNSPIDFV 834
>At4g12620.1 68417.m01988 replication control protein, putative
similar to origin recognition complex subunit 1
(Replication control protein 1)[Homo sapiens]
SWISS-PROT:Q13415
Length = 813
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 466 NDVTNIELEEILQHASLICP-VLAAALSTGD 377
ND +IE+E IL+H S+ CP + A + GD
Sbjct: 294 NDFADIEMECILRHCSVKCPKEFSKASNDGD 324
>At1g26170.1 68414.m03194 importin beta-2 subunit family protein
similar to Importin9 isoform 1 [Mus musculus]
GI:15186756; contains Pfam profile PF03810:
Importin-beta N-terminal domain
Length = 931
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -1
Query: 280 LIILEGMGRALHTNFNACLAVDSLKLAVVKNAWLAQRLGGPLFS--VIFIYEDTP 122
+++LE + +A+ A +++S+ V+ N W+A + P S VI + E P
Sbjct: 539 VLVLETLQQAIKAGHEASASIESIISPVILNVWVA-HISDPFMSIDVIDVLEGAP 592
>At1g14170.1 68414.m01675 KH domain-containing protein location of
EST 219C14T7 , gb|N38506
Length = 454
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 457 TNIELEEILQHASLICPVLAAALSTGDLVVKSSGQ 353
TN EL L+CP L A D+VV + Q
Sbjct: 71 TNEELNHFGDDGELVCPALDALFKVHDMVVADADQ 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,174,026
Number of Sequences: 28952
Number of extensions: 304159
Number of successful extensions: 653
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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