Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d15f
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 75  FCYFLSKLTIITVFLTVYSLPIV 7
           FCYF+   T+  ++ +V+   I+
Sbjct: 147 FCYFIYLFTVYYIYYSVHEASII 169


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 66  FLSKLTIITVFLTVYSLPIV 7
           FL  +TIITVF  V    +V
Sbjct: 59  FLKVVTIITVFFVVLGAAVV 78


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 66  FLSKLTIITVFLTVYSLPIV 7
           FL  +TIITVF  V    +V
Sbjct: 59  FLKVVTIITVFFVVLGAAVV 78


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 480 YH*LWHQFLLIWN*DLPMLLHFQISF 403
           Y  +W Q   +W+ D   +  F+ SF
Sbjct: 94  YPKIWEQLRAVWDPDDVFIRKFETSF 119


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 427 APSFSNFFCCFHRSKNP*ERRHV 359
           +PS + FF    R  +P +++H+
Sbjct: 71  SPSKTKFFNLIKRKDSPVQKKHI 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,419
Number of Sequences: 336
Number of extensions: 2784
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)