Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d15f
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          24   4.1  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    23   5.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   5.4  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         23   7.2  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         23   7.2  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         23   7.2  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         23   7.2  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   7.2  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   7.2  

>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 446 GTETCQCSFIFKFLLLFPQIKESLR 372
           G +  +CSFIF ++L    I+++++
Sbjct: 128 GDDYTECSFIFLYILCTMSIRQNIQ 152


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 404 LLFPQIKESLRTKACFVDVKE*TYGQLAMS*RVY 303
           LL   +KE  R    F +++   YG LAM  +VY
Sbjct: 264 LLNSSVKEDFRNAFYFHELRSANYGYLAMG-KVY 296


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 318 HGQLTIRLLLDINETCLRSQGFFDLWKQQ 404
           HG+ T RL+ D+N    R  G  D +  Q
Sbjct: 863 HGRWTYRLIPDVNRWISRRFGGVDFFLSQ 891


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 491 PTLSIISYGINFC*SGTETCQCSF 420
           PTL+   +G++F  SGT + Q S+
Sbjct: 93  PTLTADQFGLDFMTSGTLSLQGSY 116


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 491 PTLSIISYGINFC*SGTETCQCSF 420
           PTL+   +G++F  SGT + Q S+
Sbjct: 93  PTLTADQFGLDFMTSGTLSLQGSY 116


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 491 PTLSIISYGINFC*SGTETCQCSF 420
           PTL+   +G++F  SGT + Q S+
Sbjct: 93  PTLTADQFGLDFMTSGTLSLQGSY 116


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 491 PTLSIISYGINFC*SGTETCQCSF 420
           PTL+   +G++F  SGT + Q S+
Sbjct: 93  PTLTADQFGLDFMTSGTLSLQGSY 116


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 491 PTLSIISYGINFC*SGTETCQCSF 420
           PTL+   +G++F  SGT + Q S+
Sbjct: 111 PTLTADQFGLDFMTSGTLSLQGSY 134


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 491 PTLSIISYGINFC*SGTETCQCSF 420
           PTL+   +G++F  SGT + Q S+
Sbjct: 111 PTLTADQFGLDFMTSGTLSLQGSY 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,073
Number of Sequences: 2352
Number of extensions: 10575
Number of successful extensions: 72
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)