Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d15f
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC043496-1|AAH43496.1|  773|Homo sapiens pantothenate kinase 4 p...   113   4e-25
AK223546-1|BAD97266.1|  773|Homo sapiens pantothenate kinase 4 v...   113   4e-25
AK001644-1|BAA91805.1|  773|Homo sapiens protein ( Homo sapiens ...   113   4e-25
CR457334-1|CAG33615.1|  351|Homo sapiens FLJ21103 protein.             33   0.73 
BC001647-1|AAH01647.1|  351|Homo sapiens family with sequence si...    33   0.73 
BC001340-1|AAH01340.1|  351|Homo sapiens family with sequence si...    33   0.73 
AK024756-1|BAB14987.1|  351|Homo sapiens protein ( Homo sapiens ...    31   2.2  
AB065763-1|BAC05983.1|  323|Homo sapiens seven transmembrane hel...    31   3.9  

>BC043496-1|AAH43496.1|  773|Homo sapiens pantothenate kinase 4
           protein.
          Length = 773

 Score =  113 bits (272), Expect = 4e-25
 Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = +3

Query: 99  ILYEPDKYNPDTLDLLADEEAREYWLCTCEKLVEKYVKFALVNNNDPT-VEIRALKFKTC 275
           +L +P  Y PDT+DL  D  AR+YWL   E+ ++  VK A+ +  D      RA KF+  
Sbjct: 424 LLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQK 483

Query: 276 YVEALKELRINPLAHGQLTIRLLLDINETCLRSQGFFDLWKQQKKFENEGALASLSSRLA 455
           Y   L+ LR  P A+G LT+R LLD  E CL    F D + + K+ EN  AL      + 
Sbjct: 484 YWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVR 543

Query: 456 EIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILDCGLY 578
            +DA+    +R   L +G+LAGN+FDWGA+AV+++L+   Y
Sbjct: 544 SLDAL-GWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPY 583


>AK223546-1|BAD97266.1|  773|Homo sapiens pantothenate kinase 4
           variant protein.
          Length = 773

 Score =  113 bits (272), Expect = 4e-25
 Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = +3

Query: 99  ILYEPDKYNPDTLDLLADEEAREYWLCTCEKLVEKYVKFALVNNNDPT-VEIRALKFKTC 275
           +L +P  Y PDT+DL  D  AR+YWL   E+ ++  VK A+ +  D      RA KF+  
Sbjct: 424 LLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQK 483

Query: 276 YVEALKELRINPLAHGQLTIRLLLDINETCLRSQGFFDLWKQQKKFENEGALASLSSRLA 455
           Y   L+ LR  P A+G LT+R LLD  E CL    F D + + K+ EN  AL      + 
Sbjct: 484 YWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVR 543

Query: 456 EIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILDCGLY 578
            +DA+    +R   L +G+LAGN+FDWGA+AV+++L+   Y
Sbjct: 544 SLDAL-GWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPY 583


>AK001644-1|BAA91805.1|  773|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10782 fis, clone NT2RP4000415. ).
          Length = 773

 Score =  113 bits (272), Expect = 4e-25
 Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = +3

Query: 99  ILYEPDKYNPDTLDLLADEEAREYWLCTCEKLVEKYVKFALVNNNDPT-VEIRALKFKTC 275
           +L +P  Y PDT+DL  D  AR+YWL   E+ ++  VK A+ +  D      RA KF+  
Sbjct: 424 LLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDGVVKRAVASQPDSVDAAERAEKFRQK 483

Query: 276 YVEALKELRINPLAHGQLTIRLLLDINETCLRSQGFFDLWKQQKKFENEGALASLSSRLA 455
           Y   L+ LR  P A+G LT+R LLD  E CL    F D + + K+ EN  AL      + 
Sbjct: 484 YWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEFNFPDPYSKVKQRENGVALRCFPGVVR 543

Query: 456 EIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILDCGLY 578
            +DA+    +R   L +G+LAGN+FDWGA+AV+++L+   Y
Sbjct: 544 SLDAL-GWEERQLALVKGLLAGNVFDWGAKAVSAVLESDPY 583


>CR457334-1|CAG33615.1|  351|Homo sapiens FLJ21103 protein.
          Length = 351

 Score = 33.1 bits (72), Expect = 0.73
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 138 DLLADEEAREYWLCTCEKLVEKYVKFALVNNNDP-TVEIRALKFKTCYVEALKELRINPL 314
           DLL DEE++++  C  E     +V   L+    P T  +R+  FK C  E   +L     
Sbjct: 80  DLLEDEESKKFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKME 139

Query: 315 AHGQLTIRLLLDINE 359
             G+  ++ +L + E
Sbjct: 140 DSGKQLLQSVLHLME 154


>BC001647-1|AAH01647.1|  351|Homo sapiens family with sequence
           similarity 118, member B protein.
          Length = 351

 Score = 33.1 bits (72), Expect = 0.73
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 138 DLLADEEAREYWLCTCEKLVEKYVKFALVNNNDP-TVEIRALKFKTCYVEALKELRINPL 314
           DLL DEE++++  C  E     +V   L+    P T  +R+  FK C  E   +L     
Sbjct: 80  DLLEDEESKKFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKME 139

Query: 315 AHGQLTIRLLLDINE 359
             G+  ++ +L + E
Sbjct: 140 DSGKQLLQSVLHLME 154


>BC001340-1|AAH01340.1|  351|Homo sapiens family with sequence
           similarity 118, member B protein.
          Length = 351

 Score = 33.1 bits (72), Expect = 0.73
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 138 DLLADEEAREYWLCTCEKLVEKYVKFALVNNNDP-TVEIRALKFKTCYVEALKELRINPL 314
           DLL DEE++++  C  E     +V   L+    P T  +R+  FK C  E   +L     
Sbjct: 80  DLLEDEESKKFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKME 139

Query: 315 AHGQLTIRLLLDINE 359
             G+  ++ +L + E
Sbjct: 140 DSGKQLLQSVLHLME 154


>AK024756-1|BAB14987.1|  351|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21103 fis, clone CAS04883. ).
          Length = 351

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 138 DLLADEEAREYWLCTCEKLVEKYVKFALVNNNDP-TVEIRALKFKTCYVEALKELRINPL 314
           DLL DEE++++  C  E     +V   L+    P T  +R+  FK C  E    L     
Sbjct: 80  DLLEDEESKKFQKCLHEDKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDGLESKME 139

Query: 315 AHGQLTIRLLLDINE 359
             G+  ++ +L + E
Sbjct: 140 DSGKQLLQSVLHLME 154


>AB065763-1|BAC05983.1|  323|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 323

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2

Query: 120 ICLARIVYERDQNVPFCYFLSKLTIITVFLTVYSLP 13
           I +  IV ER+ +VP  +FLS L ++ + L+  ++P
Sbjct: 46  ILIVVIVMERNLHVPMYFFLSMLAVMDILLSTTTVP 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,917,136
Number of Sequences: 237096
Number of extensions: 1414985
Number of successful extensions: 3181
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3175
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)