Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d15f
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121699-1|AAM52026.1|  389|Drosophila melanogaster RE73673p pro...   142   4e-34
AE014134-881|AAF52219.1|  361|Drosophila melanogaster CG5828-PA ...   142   4e-34

>AY121699-1|AAM52026.1|  389|Drosophila melanogaster RE73673p
           protein.
          Length = 389

 Score =  142 bits (343), Expect = 4e-34
 Identities = 74/162 (45%), Positives = 103/162 (63%), Gaps = 4/162 (2%)
 Frame = +3

Query: 93  SHILYEPDKYNPDTLDLLADEEAREYWLCTCEKLVEKYVKFALVNNN-DPTVEIRALKFK 269
           S +L +P  Y PDTLDL  D +A +YW      +V K+ K A  +   D T   RA +F+
Sbjct: 32  SSLLPDPAVYQPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQEEDHTATQRAEQFQ 91

Query: 270 TCYVEALKELRIN-PLAHGQLTIRL--LLDINETCLRSQGFFDLWKQQKKFENEGALASL 440
             Y++ L+E + N P+  G++ +    LL +NET LR  GF D W +QK+ EN  A+A L
Sbjct: 92  AAYLQRLEEHQRNVPVNKGKVILGTSELLKLNETLLRRYGFTDPWLRQKRLENASAVARL 151

Query: 441 SSRLAEIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILD 566
             RL E+DA+ ++  RWTEL RGVLAGNMFDWGAQA+++IL+
Sbjct: 152 KQRLQELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILE 193


>AE014134-881|AAF52219.1|  361|Drosophila melanogaster CG5828-PA
           protein.
          Length = 361

 Score =  142 bits (343), Expect = 4e-34
 Identities = 74/162 (45%), Positives = 103/162 (63%), Gaps = 4/162 (2%)
 Frame = +3

Query: 93  SHILYEPDKYNPDTLDLLADEEAREYWLCTCEKLVEKYVKFALVNNN-DPTVEIRALKFK 269
           S +L +P  Y PDTLDL  D +A +YW      +V K+ K A  +   D T   RA +F+
Sbjct: 4   SSLLPDPAVYQPDTLDLNTDGKAADYWFNCFRDMVAKFAKVAAKSQEEDHTATQRAEQFQ 63

Query: 270 TCYVEALKELRIN-PLAHGQLTIRL--LLDINETCLRSQGFFDLWKQQKKFENEGALASL 440
             Y++ L+E + N P+  G++ +    LL +NET LR  GF D W +QK+ EN  A+A L
Sbjct: 64  AAYLQRLEEHQRNVPVNKGKVILGTSELLKLNETLLRRYGFTDPWLRQKRLENASAVARL 123

Query: 441 SSRLAEIDAITNDRQRWTELCRGVLAGNMFDWGAQAVTSILD 566
             RL E+DA+ ++  RWTEL RGVLAGNMFDWGAQA+++IL+
Sbjct: 124 KQRLQELDALADEDTRWTELVRGVLAGNMFDWGAQAISNILE 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,903,928
Number of Sequences: 53049
Number of extensions: 419529
Number of successful extensions: 1151
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)