Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d14r
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.77 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 1   NSYHTILNKIS-YCYHYNILTIYDVNNYVHKRSI 99
           N Y ++L  +  +CY   + T+Y +   VH+ SI
Sbjct: 135 NDYVSLLQLVFVFCYFIYLFTVYYIYYSVHEASI 168



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 268 EIGKIL--LLMVDFHFKANLQYKYTCLMAITVFLCIF 372
           + GK+L  L  ++++FK + +  Y  L+ +    C F
Sbjct: 114 KFGKLLINLYTINYNFKESERNDYVSLLQLVFVFCYF 150


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 182 FNGSHHSHAPSILELHH 132
           F GSHH  + S+   HH
Sbjct: 10  FYGSHHHQSGSVAGHHH 26


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 244 YIFANDG*EIGKILLLMVDF 303
           Y F ND  EI K+   +VDF
Sbjct: 188 YCFRNDNSEILKMATQLVDF 207


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 116 LFFCIFIDLLC 84
           LF+C+ I LLC
Sbjct: 227 LFYCVLIILLC 237


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 194 RHHKFNGSHHSHAPSILELHHTS 126
           ++H  +  HH HA   +  HH +
Sbjct: 320 QNHHHHAGHHIHAQHHVVNHHVA 342


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 16  ILNKISYCYHYNILTI 63
           +L ++ YC++ NIL +
Sbjct: 192 LLMELQYCHYLNILRV 207


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 16  ILNKISYCYHYNILTI 63
           +L ++ YC++ NIL +
Sbjct: 192 LLMELQYCHYLNILRV 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,499
Number of Sequences: 336
Number of extensions: 4150
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)