Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d14r
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ225187-1|ABB04094.1|  107|Homo sapiens bolA-like 3 protein.          81   4e-15
AC073263-3|AAX93059.1|  107|Homo sapiens unknown protein.              81   4e-15
BC150280-1|AAI50281.1| 1925|Homo sapiens plexin D1 protein.            31   3.8  
AY116661-1|AAM49063.1| 1925|Homo sapiens plexin D1 protein.            31   3.8  
AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein.     31   3.8  
AB065516-1|BAC05764.1|  311|Homo sapiens seven transmembrane hel...    30   8.9  

>DQ225187-1|ABB04094.1|  107|Homo sapiens bolA-like 3 protein.
          Length = 107

 Score = 81.0 bits (191), Expect = 4e-15
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -3

Query: 660 EQQLTDALKKAMPGITYISVQDISGGCGAMFEISVEAKEFVGLNRVKQHRLVTDSLKNEI 481
           E ++T  LK+  P  T I V DISGGCGAM+EI +E++EF     V+QH++V  +LK EI
Sbjct: 33  ELRVTQILKEKFPRATAIKVTDISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEI 92

Query: 480 AEMHGIRIHTT 448
            EMHG+RI T+
Sbjct: 93  KEMHGLRIFTS 103


>AC073263-3|AAX93059.1|  107|Homo sapiens unknown protein.
          Length = 107

 Score = 81.0 bits (191), Expect = 4e-15
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -3

Query: 660 EQQLTDALKKAMPGITYISVQDISGGCGAMFEISVEAKEFVGLNRVKQHRLVTDSLKNEI 481
           E ++T  LK+  P  T I V DISGGCGAM+EI +E++EF     V+QH++V  +LK EI
Sbjct: 33  ELRVTQILKEKFPRATAIKVTDISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEI 92

Query: 480 AEMHGIRIHTT 448
            EMHG+RI T+
Sbjct: 93  KEMHGLRIFTS 103


>BC150280-1|AAI50281.1| 1925|Homo sapiens plexin D1 protein.
          Length = 1925

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
 Frame = +2

Query: 386 HFRKFRCYFPLQQYSHCVAAGVV*IRMPCISAISFFRESVTNLC-CFTLFNPTN--SLAS 556
           +F  + C    Q Y H      +  + PC    S     V+N   C    NPT+      
Sbjct: 696 NFTIYDCSRTAQVYPHTACTSCLSAQWPCFWC-SQQHSCVSNQSRCEASPNPTSPQDCPR 754

Query: 557 TLISNIAPQPPDISCTLMYVIPGIAFFNASVSCCS 661
           TL+S +AP P   S  ++  +   AFF  +   CS
Sbjct: 755 TLLSPLAPVPTGGSQNILVPLANTAFFQGAALECS 789


>AY116661-1|AAM49063.1| 1925|Homo sapiens plexin D1 protein.
          Length = 1925

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
 Frame = +2

Query: 386 HFRKFRCYFPLQQYSHCVAAGVV*IRMPCISAISFFRESVTNLC-CFTLFNPTN--SLAS 556
           +F  + C    Q Y H      +  + PC    S     V+N   C    NPT+      
Sbjct: 696 NFTIYDCSRTAQVYPHTACTSCLSAQWPCFWC-SQQHSCVSNQSRCEASPNPTSPQDCPR 754

Query: 557 TLISNIAPQPPDISCTLMYVIPGIAFFNASVSCCS 661
           TL+S +AP P   S  ++  +   AFF  +   CS
Sbjct: 755 TLLSPLAPVPTGGSQNILVPLANTAFFQGAALECS 789


>AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein.
          Length = 1985

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
 Frame = +2

Query: 386  HFRKFRCYFPLQQYSHCVAAGVV*IRMPCISAISFFRESVTNLC-CFTLFNPTN--SLAS 556
            +F  + C    Q Y H      +  + PC    S     V+N   C    NPT+      
Sbjct: 756  NFTIYDCSRTAQVYPHTACTSCLSAQWPCFWC-SQQHSCVSNQSRCEASPNPTSPQDCPR 814

Query: 557  TLISNIAPQPPDISCTLMYVIPGIAFFNASVSCCS 661
            TL+S +AP P   S  ++  +   AFF  +   CS
Sbjct: 815  TLLSPLAPVPTGGSQNILVPLANTAFFQGAALECS 849


>AB065516-1|BAC05764.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = +1

Query: 487 ILQRICY*SVLFHSVQPY--EFFSFHTYLKHSATTPRYILHTDVRDSRHSLFQCICQLL- 657
           I+  +C  S LF S   +   F SF      S T P+ I+    +D   S   C+ QLL 
Sbjct: 43  IMLTVCL-SNLFKSPMYFFLSFLSFVDICYSSVTAPKMIVDLLAKDKTISYVGCMLQLLG 101

Query: 658 --FFGNTILFV 684
             FFG T +F+
Sbjct: 102 VHFFGCTEIFI 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,536,096
Number of Sequences: 237096
Number of extensions: 2142414
Number of successful extensions: 3543
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3540
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)