Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12d14r
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1545|AAM68636.1|   86|Drosophila melanogaster CG33672-P...    45   8e-05
BT023619-1|AAY85019.1|  140|Drosophila melanogaster IP05796p pro...    32   0.64 
AE014297-3592|AAF56322.1|  115|Drosophila melanogaster CG31126-P...    32   0.64 

>AE013599-1545|AAM68636.1|   86|Drosophila melanogaster CG33672-PA,
           isoform A protein.
          Length = 86

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 22/61 (36%), Positives = 34/61 (55%)
 Frame = -3

Query: 651 LTDALKKAMPGITYISVQDISGGCGAMFEISVEAKEFVGLNRVKQHRLVTDSLKNEIAEM 472
           L + LK+ +    Y+SV D S GCG  F   + +  F G   +++HRLV  +L  E+ E+
Sbjct: 9   LEEKLKRELQ-TEYVSVTDESDGCGGKFSAVIVSPAFSGKTLLQKHRLVNSTLAEELKEI 67

Query: 471 H 469
           H
Sbjct: 68  H 68


>BT023619-1|AAY85019.1|  140|Drosophila melanogaster IP05796p
           protein.
          Length = 140

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -3

Query: 570 FEISVEAKEFVGLNRVKQHRLVTDSLKNEIAE 475
           F + V +++F  L  +K+HRLV D++KN + E
Sbjct: 72  FRVFVVSEKFNDLTLIKRHRLVNDTVKNALKE 103


>AE014297-3592|AAF56322.1|  115|Drosophila melanogaster CG31126-PA
           protein.
          Length = 115

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = -3

Query: 570 FEISVEAKEFVGLNRVKQHRLVTDSLKNEIAE 475
           F + V +++F  L  +K+HRLV D++KN + E
Sbjct: 47  FRVFVVSEKFNDLTLIKRHRLVNDTVKNALKE 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,274,245
Number of Sequences: 53049
Number of extensions: 667939
Number of successful extensions: 1620
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)